FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNAS (Dihydrodipicolinate synthase OS=Syntrophus aciditrophicus (strain SB) GN=dapA PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24 Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I AI TP+ +G D A DL+ QI NG +G++ GTTGE +S +EH +I T++ V VI TGSNST EA+ T+ G L + PYY + + EGL H+ ++ P I YN+PSRTG +I P + +A+ N+ G+KE Sbjct: 6 IVAIVTPF-KNGEIDEPALRDLIEFQIENGTDGIVPCGTTGESATLSHEEHDRVIEITIDAVRKRVPVIAGTGSNSTVEAMRLTKHAHEAGADGVLVVAPYYNRPTQEGLYQHYKALAESVPIPIIPYNIPSRTGVNILPETVARLAKISNIVGIKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PSEAE (Dihydrodipicolinate synthase OS=Pseudomonas aeruginosa GN=dapA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + A+ TP+ GR D ++ LV+ + G ++ GTTGE + +EHI +I V+ + VI TG+NSTREA+ TE + G A L + PYY K + EG+ HF + P I+YNVP RT D+ P + +++ PN+ G+KE Sbjct: 6 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_ACICJ (Dihydrodipicolinate synthase OS=Acidiphilium cryptum (strain JF-5) GN=dapA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24 Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL-SMG-PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + A+ TP DGR D A + + QI G G++ GTTGE +S DEH ++ TV V VI GSN+TREAI + +VG L + PYY K + +GL+ HF +V ++G P IIYN+P R+ D+ + +AQ PN+ GVK+ Sbjct: 6 LVALVTPMHEDGRIDEAALERFIEWQIAEGTNGLVPVGTTGESPTLSHDEHKRVVEITVEVARKRVPVIAGAGSNATREAIGLAKHAESVGADGVLVVTPYYNKPTQDGLLRHFTAVADAIGIPLIIYNIPPRSVIDMSVATMARLAQHPNIVGVKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SHEON (Dihydrodipicolinate synthase OS=Shewanella oneidensis GN=dapA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP DG D + + LV I G + ++ GTTGE + +EH+ ++ TV + VIG G+N+T EAI T+ VG+ A L + PYY K + +GL++H+ +V + P I+YNVP RT D+ P + + N+ GVKE Sbjct: 6 IVALITPMNSDGSVDFASLERLVEFHIDQGTDAIVAVGTTGESATLPMNEHVTVVAQTVKFAAGRIPVIGGNGANATAEAIELTKSLSKVGVAAMLGVTPYYNKPTPKGLVAHYKAVAASTDIPQILYNVPGRTAVDMKPETVAELVSVSNIIGVKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROM2 (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=dapA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24 Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ +G D E L N NG++G+++ GTTGE +SW E L +S KVI TGSNST EAI AT + + G AL + PYY K EGL +HF S+ + P ++YN+P RTG ++ P + + N+ +K Sbjct: 14 RILTAMVTPFNENGDVDYELAIKLSNYLFENGSDGIVLCGTTGESPTLSWSEQHDLFTAVKGSLDSSCKVIVGTGSNSTIEAIEATRKAYESGADGALVVVPYYNKPPQEGLYTHFSSIANSAKDLPLMLYNIPGRTGCNLLPDTVKKLMDFSNILSIK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_XANAC (Dihydrodipicolinate synthase OS=Xanthomonas axonopodis pv. citri GN=dapA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 58/158 (36.71%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 +ITA+ TP+ PDG DL+A+ L+ Q+ G +G++V G+TGE +S DE+ L+ V V+ TG + T + I T + A+G AL + P Y + + GL +HF +V G P ++YNVP RTG D+ P + + PN+ G+KE Sbjct: 6 IITALATPFGPDGALDLDAWRRLLEQQLHGGVQGLVVAGSTGEAAALSDDEYDTLLRAAAAQVAGRVPVLAGTGLSGTAKTIAQTRRAAALGAQYALVVTPPYVRPTQAGLKAHFLAVADEGGLPVVLYNVPGRTGCDLLPETVAELVGHPNIVGIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SHESA (Dihydrodipicolinate synthase OS=Shewanella sp. (strain ANA-3) GN=dapA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP DG D + + LV I G + ++ GTTGE + +EH+ ++ TV + VIG G+N+T EAI T+ VG+ A L + PYY K + +GL++H+ +V + P I+YNVP RT D+ P + + N+ GVKE Sbjct: 6 IVALITPMNSDGSVDFASLERLVEFHIDQGTDAIVAVGTTGESATLPMNEHVTVVAQTVKFAAGRIPVIGGNGANATSEAIELTKSLSKVGVAAMLGVTPYYNKPTPKGLVAHYKAVAASTDIPQILYNVPGRTAVDMKPETVAELVAVSNIIGVKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PELCD (Dihydrodipicolinate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dapA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS--MGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP+ +GRFD E + L++ QI NG + ++ GTTGE + EH +I + V V+ TGSN+T EAI T +G AL I+PYY K S EG+ HF ++ P ++YNVP RTG ++ +A PN+ G+KE Sbjct: 6 MVAIITPFDREGRFDEETFRKLIDFQIENGTDVIVPCGTTGESATLDHAEHKKVIKTCIEQVNKRVPVLAGTGSNATSEAIELTRDAKKMGADGALLISPYYNKPSQEGVYRHFKAIADNVALPQVLYNVPGRTGMNMTAATTIRLASHPNVVGIKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_HALHL (Dihydrodipicolinate synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dapA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 311 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 D +A LV + G++ ++ GTTGE + ++EH +I TV + VIG TG+NST EAI T G AAL + PYY K + EGL+ HF ++ P I+YNVP RTG D+ P + +A PN+ G+KE Sbjct: 29 DEKALKQLVEYHVEQGSDAIVAVGTTGESATLDYEEHRDVIRATVEAAAGRIPVIGGTGANSTWEAIELTRSAMEAGCDAALLVVPYYNKPTQEGLVQHFSAIAEAVPIPQILYNVPGRTGCDMLPETVERLADLPNVVGLKE 171
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA1_BACHD (Dihydrodipicolinate synthase 1 OS=Bacillus halodurans GN=dapA1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R++TA+ TP+ + +LEA LVN I NG++ ++VGGTTGE ++ DE + L V G V VI TGSN+TR +I +++ +G+ + + PYY K S EGL HF ++ P ++YN+P R+G ++ +A+ N+ +KE Sbjct: 5 RIVTAMVTPFNEQDQVNLEATCQLVNELIANGSDALVVGGTTGESPTLTTDEKMALFHTVVEAAGGRVPVIAGTGSNNTRASIELSKKVEDLGVDGIMLVTPYYNKPSQEGLFQHFKAISESTSLPIMLYNIPGRSGVNLDAETTLRLAELRNIVSIKE 163 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |