FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_GEOUR (Dihydrodipicolinate synthase OS=Geobacter uraniireducens (strain Rf4) GN=dapA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24 Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I AI TP+ +G D E +LV QI NG + ++ GTTGE + ++EH +I V V VI TGSNST+EAI T +G AL + PYY K + EGL H+ +V P I+YNVP RTG ++ P + +A+ N+ +KE Sbjct: 6 IVAIVTPF-KNGAVDEEKLRELVEFQIENGTDAIVPCGTTGESSTLDYEEHDRVIEIVVEQVKKRVPVIAGTGSNSTKEAIEMTSHAKTLGADGALLVTPYYNKPTQEGLFLHYKAVADAVALPQILYNVPGRTGVNLLPETVARLAEHKNIVAIKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_DECAR (Dihydrodipicolinate synthase OS=Dechloromonas aromatica (strain RCB) GN=dapA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I AI TP DG DL ++ +L++ + G + ++V GTTGE ++ +EH LI V+ + VI TG+NST EAI TE G + AL + PYY K + EGL HF ++ P I+YNVP RT D+ I +A+ P + GVK+ Sbjct: 6 IVAIVTPMHEDGSLDLNSFRNLLDFHVQEGTDAIVVVGTTGESPTVNVEEHCELIKIAVDHVAGRIPVIAGTGANSTAEAIELTEFAKKAGANMALSVVPYYNKPTQEGLYRHFKAIAEAVELPVILYNVPGRTVADMSNDTILRLAEVPGIVGVKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SULSY (Dihydrodipicolinate synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=dapA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTM-AQSPNLAGVKE 733 + A+ TP+ DG D + L+ I NG + ++V GTTGE ++++EH +LI V + +I TG+NST EAI T+ VG A+L + PYY K + EG+ HF ++ P I+YN+PSRTG D+ P + PN+ G+KE Sbjct: 6 VVALITPF-KDGTLDRQGLKRLIEFHIENGTDAIVVAGTTGESPTLTYEEHELLIELAVGYSNKRIPIIAGTGANSTHEAITLTKFAEKVGADASLQVVPYYNKPTQEGIYQHFKAIAEETNIPLILYNIPSRTGVDMLPETFARLYGDFPNVIGIKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_RALSO (Dihydrodipicolinate synthase OS=Ralstonia solanacearum GN=dapA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP DG D + L++ I G +G+++ GT+GE +S DEH LI TV + VI TG NST EA+ T +VG A+L + PYY K + EG+ HF V P I+YNVP RT D+ + +AQ P + GVKE Sbjct: 8 LVAIVTPMHEDGSLDFPSLRSLIDWHIAEGTDGIVIVGTSGESPTVSVDEHRELIRVTVEQVNKRIPVIAGTGGNSTTEAVELTAYAKSVGADASLQVVPYYNKPTQEGMYLHFRKVAESVDLPVILYNVPGRTVADMSVDTMLRLAQVPGVMGVKE 164
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_NITOC (Dihydrodipicolinate synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dapA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 60/157 (38.22%), Postives = 83/157 (52.87%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + A+ TP PDG D E LV+ I NG + ++ GTTGE + EHI +I V+ + VI TG+NSTREA T G A L + PYY + + EGL HF ++ P I+YNVP+RT D+ P + +A N+ G+KE Sbjct: 6 MVALVTPMHPDGALDWEGLRRLVDFHIENGTDAIVTVGTTGESPTLEVKEHIRVIREVVDQAQGRLPVIAGTGANSTREAEELTRAALEAGADACLLVVPYYNRPTQEGLYLHFKAIAEAVPIPQILYNVPTRTACDLLPETVARLADISNIVGIKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LACF3 (Dihydrodipicolinate synthase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dapA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 63/159 (39.62%), Postives = 87/159 (54.72%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV-GMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 L+TAI TP+ +G D A D L + G G +VGGTTGE +S DE I L H V VI TGSN+T E I T + + G+ AL + P Y K + G+++HF +V P IIYN+P RTG + + T+A+ PN+AG+K+ Sbjct: 9 LLTAIVTPFTDEGTIDYPALDQLTEHLLQAGNNGFVVGGTTGETPTLSHDEKIELYTHFGRLIAGRVPVIAGTGSNNTAETIAFTNEVAQIEGIDYALVVVPPYNKPNQRGMLAHFTAVADAVELPLIIYNIPGRTGVKMETSTVLTLAEHPNIAGIKQ 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PSEA6 (Dihydrodipicolinate synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dapA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23 Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 2 Query: 275 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 A+ TP G D + LV+ I NG+ G+I GTTGE + +DEHI ++ V + VI +G+NST EAI +EQ G+ L + PYY K +G+++HF++V P ++YNVP RT D+ P + +A P + G+K+ Sbjct: 8 ALITPMYQSGEIDYPSLKKLVDFHIANGSHGLIAVGTTGESATLPFDEHIEVVKRMVEFADKKIPVIAGSGANSTAEAIFLSEQMAGTGIDGFLSVVPYYNKPQQKGMVAHFNAVADATDLPVLLYNVPGRTVADMLPDTVAELATHPKIVGLKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROM0 (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=dapA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23 Identity = 59/159 (37.11%), Postives = 85/159 (53.46%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ +G D E L N NG++G+++ GTTGE +SW E L AS KVI TGSN T EA+ AT++ + G AL + PYY K EGL HF S+ P ++YN+P RTG ++ P + + N+ +K Sbjct: 15 RILTAMVTPFTENGDVDYELAIKLSNYLFENGSDGIVLCGTTGESPTLSWAEQHELFIAVKGSLDASCKVIVGTGSNCTSEAVEATKKAYDSGADGALVVVPYYNKPPQEGLYKHFSSIAKSAKDLPLMLYNIPGRTGCNLLPDTVKKLMDFSNILSIK 173
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_HAEDU (Dihydrodipicolinate synthase OS=Haemophilus ducreyi GN=dapA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23 Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP + G + + +LV I G+ G++ GTTGE +S DEH+ +I TV + +I +GSN+T EA+ T+ VG+ L + PYY K + EGL H+ ++ P I+YNVPSRTG D+ P I +++ PN+ GVKE Sbjct: 12 IVALLTP-MTHGEVNYQEIKNLVEYHIQAGSHGIVAMGTTGESTTLSIDEHVKVIKKTVEFADGRIPIIAGSGSNATSEAVTITKLLNGVGVVGCLSVVPYYNKPTQEGLYLHYKAIAESTELPQILYNVPSRTGCDLKPETIGRLSEIPNIIGVKE 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SHESW (Dihydrodipicolinate synthase OS=Shewanella sp. (strain W3-18-1) GN=dapA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.601e-23 Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP DG D + + LV I G + ++ GTTGE + EH+ ++ TV + VIG G+N+T EAI T+ VG+ L + PYY K + +GLI+H+ +V + P I+YNVP RT D+ P + + N+ GVKE Sbjct: 6 IVALITPMNSDGSIDFASLERLVEFHIDQGTDAIVAVGTTGESATLPMSEHVTVVAQTVKFAAGRIPVIGGNGANATAEAIELTKSLSKVGVAGMLGVTPYYNKPTPKGLIAHYKAVAASTDIPQILYNVPGRTAVDMQPETVAELVGVSNIIGVKE 162 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |