FC869296

Overview
NameFC869296
Unique NameFC869296
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.751e-50
Identity = 92/162 (56.79%), Postives = 124/162 (76.54%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+  +K++PAL  GNT+VLK AEQTPLTA+ + ++  EAG P GVLN++ G+G TAG+ +A HMDVDK++FTG    G  V ++AA++NLK V+LELGGKS  I+ +DAD+++A E+A   +++N GQ C A SR YVHE VYDEFV +
Sbjct:  157 GVCGQIIPWNFPLLMAAFKLSPALAMGNTVVLKPAEQTPLTAVRLGEMVMEAGYPDGVLNILPGFGATAGSEIARHMDVDKIAFTGSTAVGHQVMQMAAETNLKKVSLELGGKSALIVCEDADLEEAAEVATTRVYFNTGQVCTASSRIYVHESVYDEFVSR 318          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 3.973e-49
Identity = 90/162 (55.56%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV  QIVPWN+PL +  WK+  AL  GNT+++K AE T L+ LY A L  +AG PPGV+N+V GYG   G ALASHMD+DK+SFTG    G  V E + +SNLK VTLE GGKSP ++F+DAD+D+A++     +FYN GQ C A SR YV   +YD+FVEK
Sbjct:  160 GVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEK 321          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 1.510e-48
Identity = 88/162 (54.32%), Postives = 122/162 (75.31%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+AL+ ++L  EAG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA   +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K
Sbjct:  181 GVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAA-DTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQK 341          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.510e-48
Identity = 88/162 (54.32%), Postives = 122/162 (75.31%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+AL+ ++L  EAG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA   +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K
Sbjct:  181 GVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAA-DTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQK 341          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.413e-46
Identity = 86/162 (53.09%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV  QIVPWN+PL +   K+  AL  GNT+++K AE T L+ LY A L  +AG PPGV+NV+ GYG   G AL +HMD+DK+SFTG    G  V E + +SNLK +TLE GGKSP ++F+DAD+D+A+E     +F+N GQ C A SR YV   +YD+FVEK
Sbjct:  160 GVVAQIVPWNYPLAMACRKMQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDITLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEK 321          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.845e-46
Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKQGTCYEA 507
            GV GQI+PWNFPLL+  WK+  AL  G TIVLK AEQTPL+ALY+A+L  +AG P GV+N++ G+G  AG AL +H  VDK++FTG  + GK +   AAKS +K VTLELGGKSP I+  DA++ +A+  A   + +NQGQ CCAGSR ++H+  YDE V++  +  E+
Sbjct:  159 GVVGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLSALYLAELIDQAGFPAGVINIIPGFGEDAGEALTNHEAVDKIAFTGSTEIGKKIMSTAAKS-IKRVTLELGGKSPNILLPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDQYDEVVDEMASYAES 326          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.196e-45
Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+  WKVAP+L  G T +LK +E   LT L +A +  E GLPPGVLN+++G G  AGA LASH  VDK+ FTG   TG  +   AAK  +KPV+LELGGKSP I+FDD D+D+AVE   F  F+  GQ C A SR  VHER+ DEF++K
Sbjct:  153 GVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKL-VKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDK 313          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.665e-45
Identity = 89/162 (54.94%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+ TWK+APAL  G T VLK +E   +T L   ++ +E GLPPGVLN+V+G GP AGA LA+H DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP I+F+D D+DQ VE   F  F+  GQ C A SR  VHE +  EF+++
Sbjct:  153 GVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASITCLEFGEVCNEVGLPPGVLNIVTGLGPDAGAPLAAHPDVDKVAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIIVFEDVDIDQVVEWTMFGCFWTNGQICSATSRLLVHESIAAEFIDR 313          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.322e-44
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+ TWKVAPAL  G T VLK +E   LT L +  +  E GLPPGVLN+++G G  AGA LASH  VDK++FTG  +TGK +  + A   +KPV+LELGGKSP I+FDD D+D+AVE A F  F N GQ C A SR  +HE++   F+++
Sbjct:  155 GVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIM-ITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDR 315          
BLAST of FC869296 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.256e-44
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+ TWK+APAL  G T VLK +E   +T L   ++ +E GLPPGVLN+++G GP AGA L SH DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP ++F+D D+D+ VE   F  F+  GQ C A SR  VHE +  EFV+K
Sbjct:  150 GVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDK 310          
The following BLAST results are available for this feature:
BLAST of FC869296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_LEITA2.751e-5056.79Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
ALDH2_YEAST3.973e-4955.56Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
ALDH5_YEAST1.510e-4854.32Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS71.510e-4854.32Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH3_YEAST1.413e-4653.09Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
ALDH4_BACSU1.845e-4653.25Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
BADH2_ARATH1.196e-4555.56Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
BADH_BETVU2.665e-4554.94Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
BADH_ORYSJ1.322e-4454.32Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BADH_SPIOL2.256e-4454.32Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC31010F09EF AbioticL1 Citrus clementina cDNA clone C31010F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869296 ID=FC869296; Name=FC869296; organism=Citrus clementina; type=EST; length=508bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCTGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTTGATGATGCTGACGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAGCAAGGCACGTGCTA
TGAGGCGT
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