FC869300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 408 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG----YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 ++T +F + I GK I LF +VVPKT +NF +LC G + G YKG FHR+IK+FM+Q SIYG FEDE+F LKH Sbjct: 1 MSTYAYFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKH 95
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 3 Query: 396 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALC-TGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHV 683 L VT+K++ DV KP GRIV GLFG PKT NFR +C G G Y G FHR+I F+IQ SIYG F+DE+ ++H+ Sbjct: 20 LSFTVTSKIYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICLRGINGTTYVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHL 116
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 384 KDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL-CTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 +D ++T KV+FD++ G K GRIVMGL+G P+T ENF L + + GY FHR+I +FMIQ SI+G++F+DE+F +KH Sbjct: 24 EDTAEDPEITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLTISRDPKMGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKH 123
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 342 SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALC-TGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVL 674 S+ R + C +A L VT++++ DV KP GRI GLFG + PKT NFR +C G G Y G FHR++ F++Q ISIYG F DE L Sbjct: 3 SLLNRIILCSAFLAVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKAL 114
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13 Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 3 Query: 420 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 VF D+ I P GR++ L+ DV PKT +NF+ LCTG+ G+ YK FHRI+++ IQ SIYG +FEDE+F + H Sbjct: 144 VFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPH 237
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12 Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 420 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 VF D+ I P GR++ L+ D PKT +NF+ LCTG+ G+ Y G FHR++++ +Q SIYG +FEDE+F + H Sbjct: 140 VFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPH 233
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 3 Query: 420 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 V+ D+ I P GR++ L+ D P+T NF+ LCTG G+ YK FHR++++ IQ SIYG +FEDE+F + H Sbjct: 146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPH 239 The following BLAST results are available for this feature:
BLAST of FC869300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869300 ID=FC869300; Name=FC869300; organism=Citrus clementina; type=EST; length=686bpback to top |