FC869302

Overview
NameFC869302
Unique NameFC869302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 70/208 (33.65%), Postives = 112/208 (53.85%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            + K  +  +  G VD GKST  G L++    I +  +   EK++ + N     F  + ++D L++ERE+GITID+A   F T +    + D PGH  + +NM+TG S  D A+++ID+  G          QTR H+ +   LG+K ++   NKMDA    Y +A Y +I  +   + K++  N   + FVPIS  +GDN++  S N+
Sbjct:   20 ENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYG-------VQVQTRRHSYICSLLGIKHLVVAVNKMDAV--DYDQAVYKKIKADYREFAKQL--NIADIRFVPISALKGDNVVNESENM 216          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_ALISL (Sulfate adenylyltransferase subunit 1 OS=Aliivibrio salmonicida (strain LFI1238) GN=cysN PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            + K+ +  +  G VD GKST  G L++    I    +E    ++  +     +   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G  +       QTR H+ +A  LG++  +   NKMD     YS++R++EI +E  ++ KK+      +  +P+S  EGDN++  S  L
Sbjct:   22 QHKSMLRFLTCGSVDDGKSTLIGRLLHDSKQIYADQLEAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIISDTPGHEQYTRNMATGASTCDVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFVVAVNKMDLV--DYSQSRFEEIKEEYVTFSKKLNNPNLDISILPLSALEGDNVVNHSAAL 220          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: NODQ_RHISB (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain BR816) GN=nodQ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 73/212 (34.43%), Postives = 117/212 (55.19%), Query Frame = 3
Query:   99 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEM---------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTN 707
            K+ +  +  G VD GKST  G L+     +D +++  FE +   +         N      A +LD L+AERE+GITID+A   F T+K    V D PGH ++ +NM+TG S AD AV++IDS  G  +       QTR H+ +A  LG++ ++   NK+D    ++ ++ +DEI ++  ++ KK+G+    +  +PI+   GDN+I  S N
Sbjct:   22 KSVLRFITCGSVDDGKSTLIGRLL-----VDAKLV--FEDQLTNLGRVGSSGAVNGGEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAVILIDSRQGILQ-------QTRRHSYIASLLGIRHVVLAVNKIDLV--EFRQSVFDEIARDYKAFAKKLGF--ASIQPIPIAARFGDNVISASPN 215          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_RHIME (Sulfate adenylyltransferase subunit 1 OS=Rhizobium meliloti GN=cysN PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26
Identity = 69/197 (35.03%), Postives = 109/197 (55.33%), Query Frame = 3
Query:  108 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMI 692
            + ++  G VD GKST  G L++    + +      +++++ + N      +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  +G++Q +   NK+D T   Y +AR+D+I  E       +G    +V  +P+S  +G+N++
Sbjct:   33 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAASLQRDSSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARVGLLE-------QTRRHATIATLMGIRQFVLAVNKIDLT--NYDRARFDQISHEFRELALSLGV--RQVTAIPVSALKGENVV 218          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_AERHH (Sulfate adenylyltransferase subunit 1 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=cysN PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 69/208 (33.17%), Postives = 113/208 (54.33%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            + K+ +  +  G VD GKST  G L++    I +  ++  E ++ ++     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G  +       QTR H+ +A  LG+KQ +   NKMD    ++S+  ++ I  E   + KK+  + + +  VP+S  +GDN++  S  L
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKGVLD-------QTRRHSFIASLLGIKQFVVAVNKMDLV--EFSQEVFERISAEYREFAKKL--SVDTIHIVPVSALDGDNVVNPSDKL 218          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFT (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysNC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26
Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 3
Query:   99 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            K  +  +  G VD GKST  GHL+Y    + +  +     ++     +     YA +LD L AERE+GITID+A   F+T K    V D PGH  + +NM TG S AD AV+++D+  G          QTR H+ +   LG++ ++   NKMD     Y +  ++ I  +  +   K+G N  +V  +P+S  EGDN+ +RS  +
Sbjct:   14 KPLLRFITCGSVDDGKSTLIGHLLYDSQCLAEDQLADLTVDSQRYGTQGEHIDYALLLDGLAAEREQGITIDVAYRYFDTEKRKFIVADCPGHAQYTRNMATGASSADAAVVLVDARKGLLT-------QTRRHSYIVALLGIRHVVLAVNKMDLV--GYDQQTFEAIASDYLALAAKLGIN--QVQCIPLSALEGDNLCKRSARM 208          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFA (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa GN=cysNC PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.261e-26
Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 3
Query:   99 KTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            K  +  +  G VD GKST  GHL+Y    +  D+      + +          YA +LD L AERE+GITID+A   F+T K    V D PGH  + +NM TG S AD AV+++D+  G          QTR H+ +   LG++ ++   NKMD     Y +  ++ I  +  +   K+G N  +V  +P+S  EGDN+ +RS  +
Sbjct:   14 KPLLRFITCGSVDDGKSTLIGHLLYDSQCLAEDQLADLMVDSQRYGTQGEHIDYALLLDGLAAEREQGITIDVAYRYFDTEKRKFIVADCPGHAQYTRNMATGASTADAAVVLVDARKGLLT-------QTRRHSYIVALLGIRHVVLAVNKMDLV--GYDQETFEAIASDYLALAAKLGIN--QVQCIPLSALEGDNLSKRSARM 208          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_SACD2 (Sulfate adenylyltransferase subunit 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysN PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 70/208 (33.65%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            ++K  +  +  G VD GKST  G L++    I +  +E    + ++      K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     YS+  ++ I +      K +G   E + FVP+S  +GDN++ +S N+
Sbjct:   20 EQKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRNDNSKHGTTGDKVDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDMAIILIDARHGVMT-------QTRRHSFIASLLGIKHLVIAINKMDLV--DYSQETFESIKQAYGEVAKTLG--QENLYFVPMSALDGDNVVNKSENM 216          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_VIBPA (Sulfate adenylyltransferase subunit 1 OS=Vibrio parahaemolyticus GN=cysN PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = 3
Query:   99 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD 713
            K+ +  +  G VD GKST  G L++    I +  +     ++  +     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV+++D+  G  +       QTR H+ ++  LG+K  +   NKMD     YS+AR++EI  E   + + +  + + +  +PIS  EGDN++++  NL+
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARKGILD-------QTRRHSFISNLLGLKHFVVAINKMDLV--DYSQARFEEIRDEYLKFSENLTGDID-IQIIPISALEGDNVVDKGQNLN 220          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: CYSN_VIBFM (Sulfate adenylyltransferase subunit 1 OS=Vibrio fischeri (strain MJ11) GN=cysN PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 69/206 (33.50%), Postives = 111/206 (53.88%), Query Frame = 3
Query:   99 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL 710
            K+ +  +  G VD GKST  G L++    I    ++    ++  +     +   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + AV++ID+  G  +       QTR H+ +A  LG++  I   NKMD    +YS++R++EI +E  ++ KK+      +  +P+S  EGDN++  S  L
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYADQLDAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCNVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFIVAVNKMDLV--EYSQSRFEEIKEEYLAFSKKLNNPNLDISILPLSALEGDNVVNPSEAL 220          
The following BLAST results are available for this feature:
BLAST of FC869302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_PSYIN5.031e-2733.65Sulfate adenylyltransferase subunit 1 OS=Psychromo... [more]
CYSN_ALISL6.571e-2733.65Sulfate adenylyltransferase subunit 1 OS=Aliivibri... [more]
NODQ_RHISB8.581e-2734.43Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
CYSN_RHIME1.121e-2635.03Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
CYSN_AERHH1.464e-2633.17Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]
CYSNC_XYLFT1.912e-2633.98Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSNC_XYLFA3.261e-2634.47Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSN_SACD24.259e-2633.65Sulfate adenylyltransferase subunit 1 OS=Saccharop... [more]
CYSN_VIBPA7.265e-2633.33Sulfate adenylyltransferase subunit 1 OS=Vibrio pa... [more]
CYSN_VIBFM7.265e-2633.50Sulfate adenylyltransferase subunit 1 OS=Vibrio fi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31010G03EF AbioticL1 Citrus clementina cDNA clone C31010G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869302 ID=FC869302; Name=FC869302; organism=Citrus clementina; type=EST; length=714bp
ATACACTCTCCCAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGA
ATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAA
GACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGA
CCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTG
ATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAA
ATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTA
CCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACC
GTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGG
TACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCACCGGTG
GTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTG
CTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGAT
GGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGA
AGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTC
CCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTC
TACCAACCTTGACT
back to top