FC869302

Overview
NameFC869302
Unique NameFC869302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF 674
            + K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+      + +  EV   ++K G+ P   P V  S F
Sbjct:    8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAF 175          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_APPPP (Elongation factor Tu OS=Apple proliferation phytoplasma GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 659
            ++K H+N+  IGHVD GK+T T  +   L            K  AE   +S+     +DK K E+ERGITI+     +ET K +   +D PGH D++KNMITG +Q D  +L++ +  G          QTREH LLA  +G+ ++I   NK D       +  +  +V+ EV   L +  ++ +K PFV
Sbjct:    8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETVKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCDLV----KEEEWIHLVEMEVRELLNEYKFDGDKTPFV 171          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 67/200 (33.50%), Postives = 96/200 (48.00%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 683
            + K H+N+  IGHVD GK+T T  +                K  A+     F     +DK   ERERGITI  A  +++T K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       K   D +  EV   L +  +   ++P V    +   EGD
Sbjct:    8 RSKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAQKGGAQFLAYDQIDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD 182          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 659
            + K H+N+  IGH+D GK+T T  +   L            K   ++  RSF     +D    ERERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK DA          D +  EV   L K G+  + +P V
Sbjct:    8 RSKPHVNVGTIGHIDHGKTTLTAAITKVLS-----------KHNPKIAFRSFDS---IDNAPEERERGITIATAHVEYETANRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYVVVFLNKCDAVE---DAELIDLVEMEVRELLNKYGFPGDDLPVV 172          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 69/200 (34.50%), Postives = 98/200 (49.00%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 683
            + K H+NI  +GHVD GK+T T  +                K  AE    +F     +D+   E  RGITI+IA  ++ET   +   +D PGH D++KNM+TG +Q D A+L++ +  G          QT EH LLA  +GV  ++   NK DA   + +    D +  EV   L   GY  + VP V +SG    EGD
Sbjct:    8 RTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGD 181          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_SACEN (Elongation factor Tu OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 683
            ++K H+NI  IGHVD GK+T T  +   L   DK           E+N   F     +DK   E++RGITI IA  +++T K +   +DAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L    +  + VP V +S     EGD
Sbjct:    8 RDKPHVNIGTIGHVDHGKTTLTAAITKVLH--DKH---------PELNP--FTPFDEIDKAPEEKQRGITIQIAHVEYQTEKRHYAHVDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEIIELVEMEVRELLSAQEFPGDDVPVVRVSALKALEGD 184          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_PHYMT (Elongation factor Tu OS=Phytoplasma mali (strain AT) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 659
            ++K H+N+  IGHVD GK+T T  +   L            K  AE   +S+     +DK K E+ERGITI+     +ET K +   +D PGH D++KNMITG +Q D  +L++ +  G          QTREH LLA  +G+ ++I   NK D       +  +  +V+ EV   L +  ++ +K PFV
Sbjct:    8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCDLV----KEEEWIHLVEMEVRELLNEYKFDGDKTPFV 171          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_OENOB (Elongation factor Tu OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 71/200 (35.50%), Postives = 101/200 (50.50%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 683
            + K H+NI  IGHVD GK+T T         I K + E+   +A +       YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D           D +  EV   L +  +  + +P +    +   +GD
Sbjct:    9 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAQAQD-------YASI-DAAPEERERGITINTAHVEYETDKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDFPGDDIPIIRGSALKALQGD 183          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 68/190 (35.79%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 659
            + K H+N+  IGHVD GKST T  +   L                E  K + FKY  + DK   E+ERGITI+I   ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK D       +   + +  EV   L K  Y  ++VP +
Sbjct:    8 RTKEHVNVGTIGHVDHGKSTLTSAITCVLAA-----------GLVEGGKAKCFKYEEI-DKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHVLLARQVNVPYIVVFMNKCDMVD---DEELLELVELEVRELLSKYEYPGDEVPVI 175          
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 68/190 (35.79%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 659
            + K H+N+  IGHVD GKST T  +   L                E  K + FKY  + DK   E+ERGITI+I   ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK D       +   + +  EV   L K  Y  ++VP +
Sbjct:    8 RTKEHVNVGTIGHVDHGKSTLTSAITCVLAA-----------GLVEGGKAKCFKYEEI-DKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHVLLARQVNVPYIVVFMNKCDMVD---DEELLELVELEVRELLSKYEYPGDEVPVI 175          
The following BLAST results are available for this feature:
BLAST of FC869302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BORDL1.852e-2132.99Elongation factor Tu OS=Borrelia duttonii (strain ... [more]
EFTU_APPPP1.852e-2134.74Elongation factor Tu OS=Apple proliferation phytop... [more]
EFTU_ANADE1.852e-2133.50Elongation factor Tu OS=Anaeromyxobacter dehalogen... [more]
EFTU_ACIBL1.852e-2135.45Elongation factor Tu OS=Acidobacteria bacterium (s... [more]
EFTU2_STRAW1.852e-2134.50Elongation factor Tu 2 OS=Streptomyces avermitilis... [more]
EFTU_SACEN2.418e-2136.00Elongation factor Tu OS=Saccharopolyspora erythrae... [more]
EFTU_PHYMT2.418e-2134.74Elongation factor Tu OS=Phytoplasma mali (strain A... [more]
EFTU_OENOB2.418e-2135.50Elongation factor Tu OS=Oenococcus oeni (strain BA... [more]
EFTU_AQUPY2.418e-2135.79Elongation factor Tu OS=Aquifex pyrophilus GN=tuf ... [more]
EFTU_AQUAE2.418e-2135.79Elongation factor Tu OS=Aquifex aeolicus GN=tufA P... [more]

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Properties
Property NameValue
Genbank descriptionC31010G03EF AbioticL1 Citrus clementina cDNA clone C31010G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869302 ID=FC869302; Name=FC869302; organism=Citrus clementina; type=EST; length=714bp
ATACACTCTCCCAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGA
ATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAA
GACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGA
CCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTG
ATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAA
ATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTA
CCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACC
GTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGG
TACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCACCGGTG
GTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTG
CTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGAT
GGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGA
AGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTC
CCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTC
TACCAACCTTGACT
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