FC869302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 64/204 (31.37%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS 701 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + +++ ++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED----MMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALDVMTKN 185
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_ANAMM (Elongation factor Tu OS=Anaplasma marginale (strain St. Maries) GN=tuf1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 71/191 (37.17%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 99 KTHINIVVIGHVDSGKSTTTGHLIY----KLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 659 K HIN+ IGHVD GK+T T L +L G +K V KY + DK ER RGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + EV L GY+ + V V Sbjct: 6 KPHINVGTIGHVDHGKTTLTAALTTVLTRRLSGANKVV----------------KYDEI-DKAPEERARGITISTAHVEYETEGRHYAHVDCPGHADYIKNMITGAAQMDVAILVVSATDGAMP-------QTREHILLAKQVGVKDIVTWINKCDVVE---DEEMLSIVEMEVRELLSNYGYDGDGVDVV 169
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 65/192 (33.85%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS 668 + K H+NI IGH+D GK+T T + L A K F+ +D E+ RGITI +A ++ET K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK+D D + EV LK + + +P V +S Sbjct: 8 RSKPHVNIGTIGHIDHGKTTLTAAITKVL--------------AKHNPKNKFRSFDSIDNAPEEKARGITIAVAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVDMVD---DSELLDLVELEVRELLKSYQFPGDDLPVVRVS 175
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 67/200 (33.50%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 683 ++K H+NI IGHVD GK+T T + L A+ + + +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P V + EGD Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVL---------------AKQGLAAARDFGSIDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLTQYNFPGDDIPIVKGSALKALEGD 181
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_PEDPA (Elongation factor Tu OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 683 + K H+NI IGHVD GK+T T I K + E+ +A++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + VP + + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKASD-------YADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDVPVLRGSALKALEGD 182
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 72/200 (36.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 683 + K H+NI IGHVD GK+T T I K + +++ ++N+ SF + + DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +SG EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLADKYP----DLNQ-SFAFDQI-DKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEILELVEMEVRELLAAQEFD-EEAPVVRVSGLKALEGD 183
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 683 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGD 183
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 683 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGD 183
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 683 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGD 183
BLAST of FC869302 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21 Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 93 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG 671 + K H+NI IGHVD GK+T T + L + + ++++ +D E+ RGITI+ A ++ETT+ + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + + E+ L ++ + +P + SG Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAAARKYDE---------------IDAAPEEKARGITINTAHVEYETTQRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLAKQVGVPSIVVFLNKVDQLD---DEELLELVELELRELLTSYDFDGDNIPIIRGSG 175 The following BLAST results are available for this feature:
BLAST of FC869302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869302 ID=FC869302; Name=FC869302; organism=Citrus clementina; type=EST; length=714bpback to top |