FC869306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.415e-43 Identity = 97/224 (43.30%), Postives = 140/224 (62.50%), Query Frame = 1 Query: 67 RMVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENI---PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 + V D + K E +GEGTYG V++A + TG VA+KK RL + EGV T LRE+ +L+ L +D +++ L+D + L+LVFE+M+TDL+ IR NI P +T KS + + KG+AFCH +LHRD+KP+NLL+ LK+AD GLAR F P + +TH++ WYRAPE+L G+ Y +AVD+W+ CIFAEL+ + G S++ Sbjct: 13 KRVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKEL-KDSNIIELIDAFPYKGN-----LHLVFEFMETDLEAVIRD-----RNIVLSPADT-KSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQ-LKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAELLLRRPFLQGSSDI 223
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.072e-43 Identity = 93/222 (41.89%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 M+ +EK+ K+GEG+YG V++ R K TG+IVA+KK EDD + LRE+ +L+ L + P++V LM+V + + K L+LVFEY D +L +Y R +P + VKS+++Q + V FCH +HRD+KP N+L+ K +K+ D G AR T P YT + T WYRAPE+L+G T Y VD+W+V C+FAEL++ L+PG S++ Sbjct: 1 MEKYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQL-KHPNLVNLMEVFRRKRK-----LHLVFEYCDHTVLNELDRYPRG-------VPEHMVKSIIWQTLQAVNFCHKQNCIHRDVKPENILIT-KHQVIKLCDFGFARILTGPCDYYTDCVATRWYRAPELLVGDTQYGPPVDVWAVGCVFAELLSGAPLWPGKSDV 208
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK7_MOUSE (Cell division protein kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.072e-43 Identity = 92/218 (42.20%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 85 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL---HEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 +EKL+ +GEG + VY+AR+K T +IVA+KK +L E +G+ T LRE+ +L+ LS P+++ L+D ++ + LVF++M+TDL+ I+ + + +K+ M +G+ + H H ILHRDLKP+NLL+D + LK+AD GLA++F P + YTH+++T WYRAPE+L G+ Y VDMW+V CI AEL+ + PGDS+L Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.072e-43 Identity = 92/218 (42.20%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 85 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL---HEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 +EKL+ +GEG + VY+AR+K T +IVA+KK +L E +G+ T LRE+ +L+ LS P+++ L+D ++ + LVF++M+TDL+ I+ + + +K+ M +G+ + H H ILHRDLKP+NLL+D + LK+AD GLA++F P + YTH+++T WYRAPE+L G+ Y VDMW+V CI AEL+ + PGDS+L Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.072e-43 Identity = 96/237 (40.51%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 37 ERVKRKEKKARMVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQN-----KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF-TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 ER + + + +D F+ + +GEGTYG+VY+AR+K TG++VALKK RL + EG P T +RE+ ILR L VV + ++ + K+ + YLVFEYMD DL + S + + +KS M QL +G+ +CH LHRD+K N+L++ +K+AD GLAR + + + YT++++TLWYR PE+LLG Y+ A+D+WS CI EL TK +F + EL Sbjct: 711 ERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIH-RSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL---VHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQ-IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLEL 942
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42 Identity = 95/237 (40.08%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 37 ERVKRKEKKARMVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQN-----KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF-TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 ER + + + +D F+ + +GEGTYG+VY+A++K TG++VALKK RL + EG P T +RE+ ILR L VV + ++ + K+ + YLVFEYMD DL + S + + +KS M QL +G+ +CH LHRD+K N+L++ +K+AD GLAR + + + YT++++TLWYR PE+LLG Y+ A+D+WS CI EL TK +F + EL Sbjct: 707 ERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQ-SVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL---VHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQ-IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLEL 938
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42 Identity = 95/237 (40.08%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 37 ERVKRKEKKARMVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQN-----KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF-TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729 ER + + + +D F+ + +GEGTYG+VY+A++K TG++VALKK RL + EG P T +RE+ ILR L VV + ++ + K+ + YLVFEYMD DL + S + + +KS M QL +G+ +CH LHRD+K N+L++ +K+AD GLAR + + + YT++++TLWYR PE+LLG Y+ A+D+WS CI EL TK +F + EL Sbjct: 707 ERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQ-SVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL---VHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQ-IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLEL 938
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKE1_ARATH (Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.575e-42 Identity = 97/221 (43.89%), Postives = 143/221 (64.71%), Query Frame = 1 Query: 76 MDAFEKLEKVGEGTYGKVYRAREKATGKI-VALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFR-QTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM---DRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPG 717 + + + K+GEGTYG V+ AR K K +A+KK + +D +GV PT +RE+ +LR +S + +VV+L++V LYL F+Y + DL + IR R + G ++ TVKSL++QL G+ + H + I+HRDLKP N+L+ + +KIAD GLAR + P+K + ++T+WYRAPE+LLGS HY++AVDMW+V CIFAEL+T LF G Sbjct: 22 LQQYNLVGKIGEGTYGLVFLARTKTPPKRPIAIKKFKQSKDGDGVSPTAIREIMLLREISHE-NVVKLVNV---HINFADMSLYLAFDYAEYDLYEIIRHHRDKVGHSLNTYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGSKHYTSAVDMWAVGCIFAELLTLKPLFQG 238
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK4_RAT (Cell division protein kinase 4 OS=Rattus norvegicus GN=Cdk4 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.058e-42 Identity = 101/224 (45.09%), Postives = 139/224 (62.05%), Query Frame = 1 Query: 70 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE---GVPPTTLREVSILRMLS--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726 M +E + ++G G YG VY+AR+ +G VALK R+ G+P +T+REV++LR L P+VVRLMDV + + LVFE++D DL+ Y+ G +PV T+K LM Q G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + T ++TLWYRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE Sbjct: 1 MATTRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPG--LPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILV-TSNGTVKLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE 219
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK4_MOUSE (Cell division protein kinase 4 OS=Mus musculus GN=Cdk4 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.058e-42 Identity = 101/224 (45.09%), Postives = 139/224 (62.05%), Query Frame = 1 Query: 70 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE---GVPPTTLREVSILRMLS--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726 M +E + ++G G YG VY+AR+ +G VALK R+ G+P +T+REV++LR L P+VVRLMDV + + LVFE++D DL+ Y+ G +PV T+K LM Q G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + T ++TLWYRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE Sbjct: 1 MAATRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPG--LPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILV-TSNGTVKLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE 219 The following BLAST results are available for this feature:
BLAST of FC869306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869306 ID=FC869306; Name=FC869306; organism=Citrus clementina; type=EST; length=741bpback to top |