FC869306

Overview
NameFC869306
Unique NameFC869306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK20_RAT (Cell division protein kinase 20 OS=Rattus norvegicus GN=Cdk20 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.645e-41
Identity = 93/224 (41.52%), Postives = 134/224 (59.82%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELHSFC 741
            MD +  L ++GEG +G V++A+   TG+IVALKK  L   ++G+P   LRE+  L+ +    +VV+L  V   G          L FE+M +DL + +R  ++    +    VKS +  L KGVAFCH + I+HRDLKP NLL+      LKIAD GLAR F+    + YTH++ T WYRAPE+L G+  Y   VD+W+V CI  EL+  + LFPG++++   C
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAVFPHGAG------FVLAFEFMLSDLAEVVRHAQRP---LAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQ-LKIADFGLARVFSPDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLC 214          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK20_MOUSE (Cell division protein kinase 20 OS=Mus musculus GN=Cdk20 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.645e-41
Identity = 93/224 (41.52%), Postives = 134/224 (59.82%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELHSFC 741
            MD +  L ++GEG +G V++A+   TG+IVALKK  L   ++G+P   LRE+  L+ +    +VV+L  V   G          L FE+M +DL + +R  ++    +    VKS +  L KGVAFCH + I+HRDLKP NLL+      LKIAD GLAR F+    + YTH++ T WYRAPE+L G+  Y   VD+W+V CI  EL+  + LFPG++++   C
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAVFPHGAG------FVLAFEFMLSDLAEVVRHAQRP---LAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQ-LKIADFGLARVFSPDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLC 214          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKL4_HUMAN (Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=CDKL4 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.129e-40
Identity = 85/218 (38.99%), Postives = 138/218 (63.30%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            M+ +EKL K GEG+YG V++ R K +G++VA+KK    EDD  V    LRE+ +L+ L + P++V L++V + + K     ++LVFEY D  L   +    +    +    +KS+++Q  + + FCH H  +HRD+KP N+L+ ++ + +KI D G A+   +P   YT  + T WYRAPE+L+G T Y ++VD+W++ C+FAEL+T   L+PG S++
Sbjct:    1 MEKYEKLAKTGEGSYGVVFKCRNKTSGQVVAVKKFVESEDDPVVKKIALREIRMLKQL-KHPNLVNLIEVFRRKRK-----MHLVFEYCDHTL---LNELERNPNGVADGVIKSVLWQTLQALNFCHIHNCIHRDIKPENILITKQGI-IKICDFGFAQIL-IPGDAYTDYVATRWYRAPELLVGDTQYGSSVDIWAIGCVFAELLTGQPLWPGKSDV 207          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK20_HUMAN (Cell division protein kinase 20 OS=Homo sapiens GN=CDK20 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.475e-40
Identity = 93/223 (41.70%), Postives = 132/223 (59.19%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELHSFC 741
            MD +  L ++GEG +G V++A+   TG+IVALKK  L   ++G P   LRE+  L+ +  + +VV+L  V             L FE+M +DL + +R  ++    +    VKS +  L KGVAFCH + I+HRDLKP NLL+      LKIAD GLAR F+    + YTH++ T WYRAPE+L G+  Y   VD+WSV CI  EL+  + LFPG +++   C
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMEDNQYVVQLKAVFPHGGG-----FVLAFEFMLSDLAEVVRHAQRP---LAQAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQ-LKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWSVGCIMGELLNGSPLFPGKNDIEQLC 214          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: Y7597_DROME (Cell division cycle 2-like protein kinase CG7597 OS=Drosophila melanogaster GN=CG7597 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.926e-40
Identity = 94/225 (41.78%), Postives = 138/225 (61.33%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDV---KQG--QNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK--YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            +D FE + ++GEGTYG+VY+AR+  T  +VALKK RL  + EG P T +RE+ ILR L+   ++V L ++   KQ   + ++ +   YLVFEYMD DL   + S      N   N   S+M QL  G+ +CH    LHRD+K  N+LM+ +   +K+AD GLAR +    ++  YT++++TLWYR PE+LLG   Y  ++D+WS  CI  EL  K  LF  ++E+
Sbjct:  801 VDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNH-RNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLES-GMVDFNEENNA--SIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRG-KVKLADFGLARLYNADDRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEM 1020          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK20_PONAB (Cell division protein kinase 20 OS=Pongo abelii GN=CDK20 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.926e-40
Identity = 91/223 (40.81%), Postives = 133/223 (59.64%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELHSFC 741
            MD +  L ++GEG +G V++A+   TG+IVALKK  L   ++G+P   LRE+  L+ +  + +VV+L  V             L FE+M +DL + +R  ++    +    VKS +  L KGV+FCH + I+HRDLKP NLL+      LKIAD GLAR F+    + YTH++ T WYRAPE+L G+  Y   VD+W+V CI  EL+  + LFPG +++   C
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEMEDNQYVVQLKAVFPHS-----AGFVLAFEFMLSDLAEVVRHAQRP---LAQAQVKSYLQMLLKGVSFCHANNIVHRDLKPANLLISASGQ-LKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGKNDIEQLC 214          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.926e-40
Identity = 91/216 (42.13%), Postives = 135/216 (62.50%), Query Frame = 1
Query:   82 AFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            ++  LEK+GEG+Y KVY+   +  G++VALK   ++ + EGVP T +RE S+L+ L +  ++V L D+   +       L  VFEYM TDL +Y+    Q    +  + V+  M+QL +G+A+ H   +LHRDLKP NLL+      LK+AD GLARA ++P + Y+ E++TLWYR P+ LLG+T YS+ +D+W   CIF E+     LFPG S +
Sbjct:  100 SYLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGL-KHANIVLLHDIVHTKE-----TLTFVFEYMHTDLAQYMS---QHPGGLHPHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLSHLG-ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNI 304          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.290e-40
Identity = 94/220 (42.73%), Postives = 134/220 (60.91%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK-KYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            VM+ FE L  VGEG YG V + R K T +IVA+KK +  E++E V  TTLRE+ +LR L ++     ++++K+   + G+  LYLVFEY++   K  +    +    +P   VKS +YQL K + +CH + I+HRD+KP NLL+    + LK+ D G AR  +      YT  + T WYR+PE+LLG+  Y  +VDMWSV CI  EL     LFPG+SE+
Sbjct:    9 VMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE----NIVELKEAFRRRGK--LYLVFEYVE---KNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV-LKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAP-YGKSVDMWSVGCILGELSDGQPLFPGESEI 217          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDKL5_HUMAN (Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=CDKL5 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.290e-40
Identity = 94/220 (42.73%), Postives = 134/220 (60.91%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK-KYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            VM+ FE L  VGEG YG V + R K T +IVA+KK +  E++E V  TTLRE+ +LR L ++     ++++K+   + G+  LYLVFEY++   K  +    +    +P   VKS +YQL K + +CH + I+HRD+KP NLL+    + LK+ D G AR  +      YT  + T WYR+PE+LLG+  Y  +VDMWSV CI  EL     LFPG+SE+
Sbjct:    9 VMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE----NIVELKEAFRRRGK--LYLVFEYVE---KNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV-LKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAP-YGKSVDMWSVGCILGELSDGQPLFPGESEI 217          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.603e-40
Identity = 96/218 (44.04%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            D FEK++K+G+GTY  VY+A++  TGKIVALKK R    +        RE+ +LR L   P+VV+L  +   +       LYLVF+YMD DL     S          + VK LM QL  G+  CH  G+LHRD+K  NLL+D   + LKIAD GLA  F    K+  T  ++TLWYRAPE+LLG+T Y   +D+WS  CI AEL+    + PG +E+
Sbjct:  116 DTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDH-PNVVKLEGLVTSRMS---CSLYLVFQYMDHDLAGLASS---PVVKFSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNLLIDDGGV-LKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEV 325          
The following BLAST results are available for this feature:
BLAST of FC869306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK20_RAT8.645e-4141.52Cell division protein kinase 20 OS=Rattus norvegic... [more]
CDK20_MOUSE8.645e-4141.52Cell division protein kinase 20 OS=Mus musculus GN... [more]
CDKL4_HUMAN1.129e-4038.99Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=... [more]
CDK20_HUMAN1.475e-4041.70Cell division protein kinase 20 OS=Homo sapiens GN... [more]
Y7597_DROME1.926e-4041.78Cell division cycle 2-like protein kinase CG7597 O... [more]
CDK20_PONAB1.926e-4040.81Cell division protein kinase 20 OS=Pongo abelii GN... [more]
CDK15_MOUSE1.926e-4042.13Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDKL5_MOUSE4.290e-4042.73Cyclin-dependent kinase-like 5 OS=Mus musculus GN=... [more]
CDKL5_HUMAN4.290e-4042.73Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=... [more]
Y1461_ARATH5.603e-4044.04Probable serine/threonine-protein kinase At1g54610... [more]

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Properties
Property NameValue
Genbank descriptionC31010G08EF AbioticL1 Citrus clementina cDNA clone C31010G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869306 ID=FC869306; Name=FC869306; organism=Citrus clementina; type=EST; length=741bp
CCTTGGCCGGAAAAAGTTGATTTTATTTTATCTTTTGAAAGAGTAAAAAG
AAAAGAAAAGAAAGCAAGAATGGTGATGGACGCATTTGAGAAGCTAGAGA
AAGTAGGAGAAGGGACGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCA
ACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTCCACGAGGACGATGA
AGGCGTACCCCCAACCACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCT
CTCGCGATCCCCATGTTGTTAGGTTGATGGATGTCAAACAAGGCCAGAAC
AAGGAAGGCAGGACGGTGCTCTACCTTGTTTTTGAGTACATGGACACTGA
TCTGAAGAAGTACATCCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTG
TTAACACTGTCAAGAGCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTC
TGCCATGGACATGGAATCCTTCATAGGGACCTTAAGCCTCACAATCTGTT
GATGGACCGAAAGACTATGACACTTAAGATAGCAGATCTTGGTTTAGCTC
GAGCATTTACTCTTCCAATTAAGAAATATACTCATGAGATATTGACCCTC
TGGTATAGGGCTCCGGAAGTCCTTTTGGGGTCCACCCATTACTCAACTGC
AGTTGATATGTGGTCTGTTGCCTGTATATTTGCGGAACTGGTTACNAAGA
CAGCACTTTTCCCTGGAGATTCTGAACTCCACAGCTTCTGC
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