FC869306

Overview
NameFC869306
Unique NameFC869306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22
Identity = 73/220 (33.18%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            V+  +++L+ +G G  G V  A +   G  VA+KK      ++       RE+ +L+ ++   +++ L++V   Q   E    +YLV E MD +L + I         +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y   VD+WSV CI  ELV    +F G   +
Sbjct:   22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK-NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGCVIFQGTDHI 231          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22
Identity = 71/216 (32.87%), Postives = 113/216 (52.31%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPG 717
            V+  ++ L+ +G G  G V  A +    + VA+KK      ++       RE+ +++ ++   +++ L++V   Q   E    +Y+V E MD +L + I+        +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y   VD+WSV CI  E+V    LFPG
Sbjct:   22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCLKILFPG 227          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CSK2A_NEUCR (Casein kinase II subunit alpha OS=Neurospora crassa GN=cka PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22
Identity = 65/224 (29.02%), Postives = 117/224 (52.23%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDS 723
            V++ +E + K+G G Y +V+        +K   K++  +KK ++            RE+ IL+ L+  P++V L+DV +    +  +   L+FEY++         FR          V+  +++L K + FCH  GI+HRD+KPHN+++D +   L++ D GLA  F  P  +Y   + + +++ PE+L+    Y  ++DMWS+  +FA ++  K   F G S
Sbjct:   28 VLENYEVVRKIGRGKYSEVFEGINVVNYQKCVIKVLKPVKKKKIK-----------REIKILQNLAGGPNIVALLDVVRDSQSKTPS---LIFEYVNNT------EFRTLYPRFNDFDVRYYIFELLKALDFCHSKGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGTEYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGAMFASMIFRKEPFFHGQS 230          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 73/220 (33.18%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            V+  +++L+ +G G  G V  A +   G  VA+KK      ++       RE+ +L+ ++   +++ L++V   Q   E    +YLV E MD +L + I         +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y   VD+WSV CI  ELV    +F G   +
Sbjct:   22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGCVIFQGTDHI 231          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 73/220 (33.18%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            V+  +++L+ +G G  G V  A +   G  VA+KK      ++       RE+ +L+ ++   +++ L++V   Q   E    +YLV E MD +L + I         +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y   VD+WSV CI  ELV    +F G   +
Sbjct:   22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGCVIFQGTDHI 231          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 70/212 (33.02%), Postives = 108/212 (50.94%), Query Frame = 1
Query:   94 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            L  +G G  G V  A +  T + VA+KK      +        RE  ++++++    +  L      +N E    +YLV E MD +L + I+       ++  + +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y+  VD+WSV CI  E++    LFPG   +
Sbjct:   27 LRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVIQM------DLDHDRMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KADCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILG-MGYTENVDIWSVGCIMGEMIRGGVLFPGTDHI 229          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CSK22_MOUSE (Casein kinase II subunit alpha' OS=Mus musculus GN=Csnk2a2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 65/218 (29.82%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 711
            D ++ + K+G G Y +V+ A      E+   KI+  +KK ++            REV IL  L    ++++L+D VK   +K       LVFEY++         F+Q  + +    ++  MY+L K + +CH  GI+HRD+KPHN+++D +   L++ D GLA  F  P ++Y   + + +++ PE+L+    Y  ++DMWS+ C+ A ++ +   F
Sbjct:   38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK-----------REVKILENLRGGTNIIKLIDTVKDPVSKTPA----LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CSK22_HUMAN (Casein kinase II subunit alpha' OS=Homo sapiens GN=CSNK2A2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 65/218 (29.82%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 711
            D ++ + K+G G Y +V+ A      E+   KI+  +KK ++            REV IL  L    ++++L+D VK   +K       LVFEY++         F+Q  + +    ++  MY+L K + +CH  GI+HRD+KPHN+++D +   L++ D GLA  F  P ++Y   + + +++ PE+L+    Y  ++DMWS+ C+ A ++ +   F
Sbjct:   38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK-----------REVKILENLRGGTNIIKLIDTVKDPVSKTPA----LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CSK22_BOVIN (Casein kinase II subunit alpha' OS=Bos taurus GN=CSNK2A2 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22
Identity = 65/218 (29.82%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 711
            D ++ + K+G G Y +V+ A      E+   KI+  +KK ++            REV IL  L    ++++L+D VK   +K       LVFEY++         F+Q  + +    ++  MY+L K + +CH  GI+HRD+KPHN+++D +   L++ D GLA  F  P ++Y   + + +++ PE+L+    Y  ++DMWS+ C+ A ++ +   F
Sbjct:   38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK-----------REVKILENLRGGTNIIKLIDTVKDPVSKTPA----LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.988e-22
Identity = 63/217 (29.03%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 711
            D ++ + K+G G Y +V+ A      EK   KI+  +KK ++            RE+ IL  L   P+++ L D+ +  +   RT   LVFE+++         F+Q  + +    ++  MY++ K + +CH  GI+HRD+KPHN+++D +   L++ D GLA  F  P ++Y   + + +++ PE+L+    Y  ++DMWS+ C+ A ++ +   F
Sbjct:   37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK-----------REIKILENLRGGPNIITLADIVK--DPVSRTPA-LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232          
The following BLAST results are available for this feature:
BLAST of FC869306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK09_CHICK5.269e-2233.18Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]
MK08_RAT5.269e-2232.87Mitogen-activated protein kinase 8 OS=Rattus norve... [more]
CSK2A_NEUCR5.269e-2229.02Casein kinase II subunit alpha OS=Neurospora crass... [more]
MK09_RAT6.882e-2233.18Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_HUMAN6.882e-2233.18Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
JNK_DROME6.882e-2233.02Stress-activated protein kinase JNK OS=Drosophila ... [more]
CSK22_MOUSE6.882e-2229.82Casein kinase II subunit alpha' OS=Mus musculus GN... [more]
CSK22_HUMAN6.882e-2229.82Casein kinase II subunit alpha' OS=Homo sapiens GN... [more]
CSK22_BOVIN6.882e-2229.82Casein kinase II subunit alpha' OS=Bos taurus GN=C... [more]
CSK21_XENLA8.988e-2229.03Casein kinase II subunit alpha OS=Xenopus laevis G... [more]

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Properties
Property NameValue
Genbank descriptionC31010G08EF AbioticL1 Citrus clementina cDNA clone C31010G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869306 ID=FC869306; Name=FC869306; organism=Citrus clementina; type=EST; length=741bp
CCTTGGCCGGAAAAAGTTGATTTTATTTTATCTTTTGAAAGAGTAAAAAG
AAAAGAAAAGAAAGCAAGAATGGTGATGGACGCATTTGAGAAGCTAGAGA
AAGTAGGAGAAGGGACGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCA
ACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTCCACGAGGACGATGA
AGGCGTACCCCCAACCACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCT
CTCGCGATCCCCATGTTGTTAGGTTGATGGATGTCAAACAAGGCCAGAAC
AAGGAAGGCAGGACGGTGCTCTACCTTGTTTTTGAGTACATGGACACTGA
TCTGAAGAAGTACATCCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTG
TTAACACTGTCAAGAGCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTC
TGCCATGGACATGGAATCCTTCATAGGGACCTTAAGCCTCACAATCTGTT
GATGGACCGAAAGACTATGACACTTAAGATAGCAGATCTTGGTTTAGCTC
GAGCATTTACTCTTCCAATTAAGAAATATACTCATGAGATATTGACCCTC
TGGTATAGGGCTCCGGAAGTCCTTTTGGGGTCCACCCATTACTCAACTGC
AGTTGATATGTGGTCTGTTGCCTGTATATTTGCGGAACTGGTTACNAAGA
CAGCACTTTTCCCTGGAGATTCTGAACTCCACAGCTTCTGC
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