FC869306

Overview
NameFC869306
Unique NameFC869306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.315e-60
Identity = 117/217 (53.92%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            D + +++ +GEGTYG VYRA ++ATG+IVALKK RL   DEG+P T LREVSIL+ +   P++V L+DV     K     LYL+FEY+D DLKK   +  + G      T+K ++YQL +G++FCH H I+HRDLKP N+L+     ++KIAD GLARAF +P+  YTHE++TLWYRAPE+LLG  HY+ AVDMWS+ CIFAEL     LF GDSE+
Sbjct:   21 DRYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHH-PNIVNLLDVICADGK-----LYLIFEYVDHDLKK---ALEKRGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILVTTDN-SVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAELARGKVLFRGDSEI 227          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.419e-59
Identity = 110/204 (53.92%), Postives = 153/204 (75.00%), Query Frame = 1
Query:  118 YGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            YG VY+AR+  T + +ALKK RL ++DEGVP T +RE+S+L+ +  + ++V L DV   + +     LYLVFEY+D DLKK++ S  +  +++  + VK  + Q+ +GVA+CH H +LHRDLKP NLL+DR + T+K+AD GLARAF +P++ +THE++TLWYRAPEVLLGS HYST VD+WSV CIFAE+V +  LFPGDSE+
Sbjct:    2 YGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHE-NIVNLKDVVHREKR-----LYLVFEYLDLDLKKHMDSCPEFSQDL--HMVKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEI 197          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.390e-59
Identity = 112/218 (51.38%), Postives = 154/218 (70.64%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            +D F KLEK+GEGTYG VY+ R + T  +VA+KK RL  +DEGVP T +RE+S+L+ L   P+VV L  V   +N+     LYL+FE++  DLK+Y+ +  +  E +P  T+KS  +Q+ + + FCH   ++HRDLKP NLL+D K   +K+AD GLARA  +PI+ YTHE++TLWYRAPE+L+G+  YS  VDMWS+ CIFAE+ TK  LF GDSE+
Sbjct:   13 LDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-----LYLIFEFLSYDLKRYMDTLSKE-EYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKG-AIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEI 222          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.201e-58
Identity = 112/219 (51.14%), Postives = 156/219 (71.23%), Query Frame = 1
Query:   73 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            ++D F++ EK+GEGTYG VY+AR  +TG+ VALKK RL  + EGVP T +RE+S+L+ L + P+VV+L DV    N      LY++FEY++ DLKK +   +          +KS M+Q+   V FCH + ILHRDLKP NLL+D     +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG+  YST VD+WS+ CIF+E++ + +LFPGDSE+
Sbjct:    4 ILDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNL-KHPNVVQLFDVVISGNN-----LYMIFEYLNMDLKKLMDKKKDV---FTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGK-IKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDSEI 212          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.568e-58
Identity = 114/217 (52.53%), Postives = 155/217 (71.43%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M  + K+EK+GEGTYG VY+A+    G+I ALKK R+ E+DEG+P T +RE+S+L+ L   P++V L DV   +       L LVFEY+D DLKK + +       +   T KS +YQ+ +G+++CH H ILHRDLKP NLL++R+ + LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS  YSTAVD+WSV CIFAE++    LFPG SE
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNNH-GEICALKKIRVEEEDEGIPSTAIREISLLKELHH-PNIVWLRDVIHSEK-----CLTLVFEYLDQDLKKLLDA---CDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGV-LKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.568e-58
Identity = 114/217 (52.53%), Postives = 155/217 (71.43%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M  + K+EK+GEGTYG VY+A+    G+I ALKK R+ E+DEG+P T +RE+S+L+ L   P++V L DV   +       L LVFEY+D DLKK + +       +   T KS +YQ+ +G+++CH H ILHRDLKP NLL++R+ + LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS  YSTAVD+WSV CIFAE++    LFPG SE
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNNH-GEICALKKIRVEEEDEGIPSTAIREISLLKELHH-PNIVWLRDVIHSEK-----CLTLVFEYLDQDLKKLLDA---CDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGV-LKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.783e-58
Identity = 117/214 (54.67%), Postives = 153/214 (71.50%), Query Frame = 1
Query:   85 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            +++LEK+GEG+YG VYRAR+  T  IVALK+ RL   +EGVP T +RE+SIL+ L R  ++VRL+DV   +N+     L LVFEYM+ DLKKY+   R +G N+   T++  M  L KGV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KKYTHE++TLWYR+P+VLLGST Y T VD+WSV CIFAE+     LF G ++
Sbjct:    5 YQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKEL-RHENIVRLLDVCHSENR-----LNLVFEYMEMDLKKYMD--RASG-NLDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKND 208          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.264e-57
Identity = 108/218 (49.54%), Postives = 153/218 (70.18%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            ++ F KLEK+GEGTYG VY+ + + T  +VA+KK RL  +DEGVP T +RE+S+L+ L   P+VV L  V   +N+     L+L+FE++  DLK+Y+    +  E +P+ T+KS  +Q+ + + FCH   ++HRDLKP NLL+D     +K+AD GLARA  +PI+ YTHE++TLWYRAPE+L+G+  YS  VDMWS+ CIFAE+ TK  LF GDSE+
Sbjct:   19 LNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-----LFLIFEFLSFDLKRYMDQLGKD-EYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNG-AIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEI 228          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.588e-57
Identity = 115/217 (53.00%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P TT+RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH   +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS  YST +D+WSV CIFAE+V  T LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.588e-57
Identity = 115/217 (53.00%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P TT+RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH   +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS  YST +D+WSV CIFAE+V  T LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206          
The following BLAST results are available for this feature:
BLAST of FC869306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CC2H3_TRYBB8.315e-6053.92Cell division control protein 2 homolog 3 OS=Trypa... [more]
CDC2B_ANTMA2.419e-5953.92Cell division control protein 2 homolog B (Fragmen... [more]
CDC2_CAEBR5.390e-5951.38Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2C_DROME1.201e-5851.14Cell division control protein 2 cognate OS=Drosoph... [more]
CDC2H_THEPA1.568e-5852.53Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_THEAN1.568e-5852.53Cell division control protein 2 homolog OS=Theiler... [more]
CC2H1_TRYCO7.783e-5854.67Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC2_CAEEL2.264e-5749.54Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2H_PLAFK6.588e-5753.00Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF76.588e-5753.00Cell division control protein 2 homolog OS=Plasmod... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31010G08EF AbioticL1 Citrus clementina cDNA clone C31010G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869306 ID=FC869306; Name=FC869306; organism=Citrus clementina; type=EST; length=741bp
CCTTGGCCGGAAAAAGTTGATTTTATTTTATCTTTTGAAAGAGTAAAAAG
AAAAGAAAAGAAAGCAAGAATGGTGATGGACGCATTTGAGAAGCTAGAGA
AAGTAGGAGAAGGGACGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCA
ACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTCCACGAGGACGATGA
AGGCGTACCCCCAACCACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCT
CTCGCGATCCCCATGTTGTTAGGTTGATGGATGTCAAACAAGGCCAGAAC
AAGGAAGGCAGGACGGTGCTCTACCTTGTTTTTGAGTACATGGACACTGA
TCTGAAGAAGTACATCCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTG
TTAACACTGTCAAGAGCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTC
TGCCATGGACATGGAATCCTTCATAGGGACCTTAAGCCTCACAATCTGTT
GATGGACCGAAAGACTATGACACTTAAGATAGCAGATCTTGGTTTAGCTC
GAGCATTTACTCTTCCAATTAAGAAATATACTCATGAGATATTGACCCTC
TGGTATAGGGCTCCGGAAGTCCTTTTGGGGTCCACCCATTACTCAACTGC
AGTTGATATGTGGTCTGTTGCCTGTATATTTGCGGAACTGGTTACNAAGA
CAGCACTTTTCCCTGGAGATTCTGAACTCCACAGCTTCTGC
back to top