FC869306

Overview
NameFC869306
Unique NameFC869306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.917e-56
Identity = 114/217 (52.53%), Postives = 153/217 (70.51%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P T +RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP++L+GS  YST +DMWSV CIFAE+V    LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHS-NIVKLYDVIHTKKR-----LILVFEHLDQDLKKLLDVCDGGLESV---TAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.504e-56
Identity = 114/217 (52.53%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A + + G+  ALKK RL ++DEG+P T +RE+SIL+ L R  ++V+L DV   + +     L LVFE++D DLKK I       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P ++YTHE++TLWYRAP++L+GS  YST +D+WSV CIFAE+V    LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTAIREISILKEL-RHSNIVKLYDVIHAKKR-----LILVFEHLDQDLKKLIDVCDGGLESV---TAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGASE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 114/216 (52.78%), Postives = 149/216 (68.98%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTK-TALFPGD 720
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKS MYQL KG+AFCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST++DMWS  CIFAEL      LFPG+
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 113/217 (52.07%), Postives = 153/217 (70.51%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P T +RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP++L+GS  YST +D+WSV CIFAE+V    LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHS-NIVKLYDVIHTKKR-----LILVFEHLDQDLKKLLDVCDGGLESV---TAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSE 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.284e-56
Identity = 113/217 (52.07%), Postives = 154/217 (70.97%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A + + G+  ALKK RL ++DEG+P T +RE+SIL+ L R  ++V+L DV   + +     L LVFE++D DLKK I       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P ++YTHE++TLWYRAP++L+GS  YST +D+WSV CIFAE+V    LFPG S+
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTAIREISILKEL-RHSNIVKLYDVIHAKKR-----LILVFEHLDQDLKKLIDVCDGGLESV---TAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSD 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.119e-55
Identity = 114/219 (52.05%), Postives = 149/219 (68.04%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSEL 729
            M  +EKLEK+GEGTYG V++ R + T +IVALK+ RL EDDEGVP + LRE+ +L+ L +  ++VRL DV   + K     L LVFE+ D DLKKY   F     +I +   +S M QL +G+AFCH H +LHRDLKP NLL++ K   LK+AD GLARAF +P+K Y+ E++TLWYR P+VL G+  Y+T++DMWS  CIFAEL      LFPG   L
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKK-----LTLVFEHCDQDLKKY---FDSLNGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELADAGRPLFPGSDVL 209          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.119e-55
Identity = 109/214 (50.93%), Postives = 150/214 (70.09%), Query Frame = 1
Query:   85 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            +E+L+K+GEG+YG V+RAR+  TG IVA+K+ RL +++EGVP T +RE+SIL+ L R  ++VRL+DV   + +     L LVFE M+ DLKKY+      G ++   T++  M  L  GV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KK+T E++TLWYR+P+VLLGST Y T VD+WSV CIFAE+     LF G ++
Sbjct:    5 YERLQKIGEGSYGVVFRARDVTTGTIVAVKRIRLEKEEEGVPCTAIREISILKEL-RHENIVRLLDVCHSEKR-----LTLVFECMEMDLKKYMD---HVGGDLDAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKND 208          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.768e-55
Identity = 112/216 (51.85%), Postives = 149/216 (68.98%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTK-TALFPGD 720
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKSL++QL KG+ FCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST++DMWS  CIFAEL      LFPG+
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.167e-55
Identity = 114/218 (52.29%), Postives = 155/218 (71.10%), Query Frame = 1
Query:   76 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-TLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 726
            M+ +  LEK+GEGTYG VY+A + + G+  ALKK RL ++DEG+P T ++RE+SIL+ L R  ++V+L DV   + +     L LVFE++D DLKK I       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P ++YTHE++TLWYRAP++L+GS  YST +D+WSV CIFAE+V    LFPG SE
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTVSIREISILKEL-RHSNIVKLYDVIHAKKR-----LILVFEHLDQDLKKLIDVCDGGLESV---TAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSE 207          
BLAST of FC869306 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.167e-55
Identity = 103/217 (47.47%), Postives = 145/217 (66.82%), Query Frame = 1
Query:   79 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 729
            ++F+KLEK+GEGTYG VY+ARE+ T ++VALKK RL  ++EG+P TT+RE+ +L+ L     +V L DV    NK     +YLVFEY++ DL++Y+      G  +    V+ +  QL   + +CH   I HRDLKP N+L+D K   +K+AD GL RA  +P++ YT E++TLWYR PE+LLG  +Y  +VD+WS ACI AE+V     FPGDSE+
Sbjct:    3 ESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHST-IVELSDVIYNNNK-----MYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKE-NIKLADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYYDASVDVWSAACIMAEVVLMRPFFPGDSEI 212          
The following BLAST results are available for this feature:
BLAST of FC869306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_PLAVI1.917e-5652.53Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA2.504e-5652.53Cell division control protein 2 homolog OS=Plasmod... [more]
CDK5_XENLA5.577e-5652.78Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2H_PLAKH5.577e-5652.07Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLACH7.284e-5652.07Cell division control protein 2 homolog OS=Plasmod... [more]
CDK5_GLOMM2.119e-5552.05Cell division protein kinase 5 homolog OS=Glossina... [more]
CC2H1_TRYBB2.119e-5550.93Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK5_RAT2.768e-5551.85Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDC2H_PLAYO6.167e-5552.29Cell division control protein 2 homolog OS=Plasmod... [more]
CDC28_ENCCU6.167e-5547.47Probable cell division control protein 28 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC31010G08EF AbioticL1 Citrus clementina cDNA clone C31010G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869306 ID=FC869306; Name=FC869306; organism=Citrus clementina; type=EST; length=741bp
CCTTGGCCGGAAAAAGTTGATTTTATTTTATCTTTTGAAAGAGTAAAAAG
AAAAGAAAAGAAAGCAAGAATGGTGATGGACGCATTTGAGAAGCTAGAGA
AAGTAGGAGAAGGGACGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCA
ACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTCCACGAGGACGATGA
AGGCGTACCCCCAACCACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCT
CTCGCGATCCCCATGTTGTTAGGTTGATGGATGTCAAACAAGGCCAGAAC
AAGGAAGGCAGGACGGTGCTCTACCTTGTTTTTGAGTACATGGACACTGA
TCTGAAGAAGTACATCCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTG
TTAACACTGTCAAGAGCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTC
TGCCATGGACATGGAATCCTTCATAGGGACCTTAAGCCTCACAATCTGTT
GATGGACCGAAAGACTATGACACTTAAGATAGCAGATCTTGGTTTAGCTC
GAGCATTTACTCTTCCAATTAAGAAATATACTCATGAGATATTGACCCTC
TGGTATAGGGCTCCGGAAGTCCTTTTGGGGTCCACCCATTACTCAACTGC
AGTTGATATGTGGTCTGTTGCCTGTATATTTGCGGAACTGGTTACNAAGA
CAGCACTTTTCCCTGGAGATTCTGAACTCCACAGCTTCTGC
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