FC869307

Overview
NameFC869307
Unique NameFC869307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF1_THEEB (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=acsF1 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.865e-43
Identity = 89/161 (55.28%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K   KET+LTPRFYTTDF+ M  +  TE     N+AE EA+L+EF+ DYN+ HFVR++EF+++ D + G  R++F+EFLERSCTAEFSGFLLYKEL RRLK  NP++AE F+LMSRDEARHAGFLNK ++DF +        Q    T+F+P+  F   ++
Sbjct:   18 KAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFRCDYNRHHFVRDEEFEQSWDHIDGETRRLFIEFLERSCTAEFSGFLLYKELSRRLKDRNPLLAECFALMSRDEARHAGFLNKAMADFNLSLDLGFLTQHRSYTYFEPEFIFYATYL 173          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNSC (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9605) GN=acsF PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 87/161 (54.04%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K  +K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN+EF+ AADK+    R++F+EFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF M         + + TFFKPK  F   ++
Sbjct:   16 KDPVKDTILTPRFYTTDFEAMAAM-----DLQPNEAELEAICEEFRKDYNRHHFVRNEEFEGAADKLDPETRKVFIEFLEQSCTSEFSGFLLYKELSRRIKAKNPLLAECFAHMARDEARHAGFLNKSMSDFGMQLDLGFLTANKDYTFFKPKFIFYATYL 171          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPX (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH8102) GN=acsF PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 87/161 (54.04%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K  +K+T+LTPRFYTTDFD+M  +     + + N+AE EA+ +EF+ DYN+ HFVRN +F  AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP++AE F+ M+RDEARHAGFLNK +SDF M         + + TFF+PK  F   ++
Sbjct:   16 KDPVKDTILTPRFYTTDFDDMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDDFDGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKQQNPLLAECFAHMARDEARHAGFLNKAMSDFGMQLDLGFLTANKDYTFFQPKFIFYATYL 171          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.521e-42
Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            +T+ KETLLTPRFYTTDF+EM    N +I+   NQ +F A+L+EF+ DYN  HF+R++EF ++   ++   + +F+EFLERSCTAEFSGFLLYKEL R+LK  NPV+AE F LMSRDEARHAGFLNK + DF +        +S + TFF PK  F   ++
Sbjct:    9 QTSSKETLLTPRFYTTDFEEMA---NMDISG--NQEDFLAILEEFRADYNSEHFIRDEEFNQSWSNLEHKTKSLFIEFLERSCTAEFSGFLLYKELSRKLKDRNPVIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKSRKYTFFSPKFIFYATYL 164          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNS3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9311) GN=acsF PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41
Identity = 88/161 (54.66%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K   K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN EF  AAD++    R++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE FS M+RDEARHAGFLNK +SDF +         S   TFFKPK  F   ++
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNGEFDGAADQLDPETRKVFVEFLEQSCTSEFSGFLLYKELSRRIKTKNPLLAECFSHMARDEARHAGFLNKSMSDFGLQLDLGFLTSSKSYTFFKPKFIFYATYL 175          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPW (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH7803) GN=acsF PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWAS*QS*E-ITFFKPKLSFMHIFI 715
            K   K+T+LTPRFYTTDF+ M  +     + + N+AE EA+ +EF+ DYN+ HFVRN EF+ AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF +        + +  TFF+PK  F   ++
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDEFEGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKTRNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKSYTFFQPKFIFYATYL 175          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNR3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain RCC307) GN=acsF PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41
Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWAS*QS*E-ITFFKPKLSFMHIFI 715
            K  +K+T+LTPRFYTTDF+ M  +     + + NQ E EA+ +EF+ DYN+ HFVRN+ F  AADK+    R++FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP++AE F+ M+RDEARHAGFLNK + DF +        + +  TFFKPK  F   ++
Sbjct:   20 KDPVKDTILTPRFYTTDFEAMAAM-----DLRPNQEELEAICEEFRKDYNRHHFVRNEAFDGAADKLDPETRRVFVEFLEQSCTSEFSGFLLYKELSRRIKQKNPLLAECFAHMARDEARHAGFLNKAMGDFGVQLDLGFLTANKAYTFFKPKFIFYATYL 175          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 2
Query:  248 KETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            +ETLLTPRFYTTDF+EM ++  +E     N+ +F A+L+EF+ DYN  HF+R +EF ++   ++   + +F+EFLERSCTAEFSGFLLYKEL R+LK +NP++AE F LMSRDEARHAGFLNK + DF +        ++ + TFF PK  F   ++
Sbjct:   13 RETLLTPRFYTTDFEEMASMNISE-----NEQDFFAILEEFRADYNSQHFIRGEEFNQSWSNLETKTKSLFIEFLERSCTAEFSGFLLYKELSRKLKDSNPIIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKTRKYTFFSPKFIFYATYL 164          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_CYAME (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Cyanidioschyzon merolae GN=acsF PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40
Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 2
Query:  251 ETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            +TLLTPRFYTTDFD+M      +I+K  N+AE EA++ EF+ DYNQTHF+R+ EF +   +M    RQ F EFLERSCTAEFSGFLLYKEL RRLK TNP++AE F  MSRDEARHAGFLNK ++DF +        +  + TFF PK  F   ++
Sbjct:   12 QTLLTPRFYTTDFDQMAKY---DISK--NRAEIEAIVNEFRKDYNQTHFIRDDEFDQVWTQMPESKRQWFKEFLERSCTAEFSGFLLYKELSRRLKDTNPLLAEGFGYMSRDEARHAGFLNKAMADFGVSLDLGFLTKHRQYTFFAPKFIFYATYL 162          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROMP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=acsF PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40
Identity = 77/132 (58.33%), Postives = 103/132 (78.03%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKIDAETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDF 144          
The following BLAST results are available for this feature:
BLAST of FC869307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF1_THEEB3.865e-4355.28Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNSC1.125e-4254.04Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPX1.125e-4254.04Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE9.521e-4254.66Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNS31.243e-4154.66Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPW2.770e-4153.42Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNR36.171e-4152.80Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU1.375e-4052.23Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_CYAME6.823e-4057.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROMP8.911e-4058.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionC31010G09EF AbioticL1 Citrus clementina cDNA clone C31010G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869307 ID=FC869307; Name=FC869307; organism=Citrus clementina; type=EST; length=716bp
AAGCCACTCAGTTTCCCTCTAGTACAAAAACTGGTTCCAGAAATGGCAGC
TGAGATGGCACTGGTCAAACTTGACCAGCAAATTCAGCACCATCGCCACC
ACTACTAAGCCTAGGTTCAGCTACCCGAAAGCAACATGTACATCTCTGAG
CACAAGATTTTGTACAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTG
CTGCCACTGCCCAAAAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAG
GAGACCCTTCTGACACCAAGGTTTTATACAACAGATTTTGATGAAATGGA
GACCCTTTTCAACACTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTG
AGGCATTGCTTCAAGAATTCAAGACTGATTATAACCAGACTCACTTTGTG
AGGAACAAGGAGTTCAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAG
GCAGATCTTTGTTGAGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTG
GTTTCCTTCTTTACAAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCA
GTGGTAGCTGAGATTTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGC
CGGGTTTCTGAACAAGGGGCTATCTGATTTCATTATGCATTGGACTTGGG
CTTCCTGACAAAGCTAGGAAATCACATTTTTCAAGCCAAAGTTATCTTTT
ATGCACATATTTATCT
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