FC869307

Overview
NameFC869307
Unique NameFC869307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM5 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9515) GN=acsF PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40
Identity = 77/132 (58.33%), Postives = 103/132 (78.03%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEEELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM9 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9312) GN=acsF PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39
Identity = 78/132 (59.09%), Postives = 101/132 (76.52%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF  AA+K+    R++FV+FLE SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM2 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9215) GN=acsF PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39
Identity = 77/132 (58.33%), Postives = 103/132 (78.03%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF
Sbjct:   18 KEIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM0 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9301) GN=acsF PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39
Identity = 77/132 (58.33%), Postives = 102/132 (77.27%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF
Sbjct:   18 KAPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROMS (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain AS9601) GN=acsF PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 77/132 (58.33%), Postives = 102/132 (77.27%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKVKNPLLAECFAHMARDEARHAGFLNKSMSDF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_CYACA (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Cyanidium caldarium GN=acsF PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 86/161 (53.42%), Postives = 111/161 (68.94%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K  IKETLL PRFYTTDFDE+     +  +   N  E EA++ EF++DYN+ HF+R++EF     ++    +Q+FVEFLERSCTAEFSGFLLYKEL R+LK+  PV+AE F LMSRDEARHAGFLNK ++DF +        ++   TFFKPK  F   ++
Sbjct:   11 KKTIKETLLAPRFYTTDFDEI-----SRYDISSNFEEIEAIVNEFRSDYNKKHFIRDEEFDRHWSQIDAQTKQMFVEFLERSCTAEFSGFLLYKELARKLKEKMPVLAEGFLLMSRDEARHAGFLNKAMADFNLTLDLGFMTKNRRYTFFKPKFIFYATYL 166          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNP6 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=acsF PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.681e-38
Identity = 82/161 (50.93%), Postives = 109/161 (67.70%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF +         + + T+FKP   F   ++
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTYFKPAYIFYATYL 173          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_SYNE7 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=acsF PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.681e-38
Identity = 82/161 (50.93%), Postives = 109/161 (67.70%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFIMHWTWA-S*QS*EITFFKPKLSFMHIFI 715
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF +         + + T+FKP   F   ++
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTYFKPAYIFYATYL 173          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF2_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Synechocystis sp. (strain PCC 6803) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38
Identity = 77/132 (58.33%), Postives = 97/132 (73.48%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 631
            K  +KETLLTPRFYTTDFD++  L  T     L   E EA L+E + DYN+ HFVRN +FK + D + G  R  F++FLERSCT+EFSGFLL+KEL RRLK  +P +AE F L++RDEARHAGF+NK ++DF
Sbjct:   18 KAPVKETLLTPRFYTTDFDKVANLVLT-----LQDEEIEAALEELRADYNRYHFVRNDDFKRSFDHIDGATRLAFIDFLERSCTSEFSGFLLFKELSRRLKNRSPKLAEAFHLLARDEARHAGFINKAMADF 144          
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF2_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Anabaena sp. (strain PCC 7120) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.890e-38
Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 2
Query:  236 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 628
            K  ++ETLLTPRFYTTDFD +  L     +   N+ E  A+++E + DYN+ HFVR++EFK++ D + G  R+ F++FLERSCT+EFSGFLL+KEL RR+K  NP++AE F  M+RDEARHAGFLNK +SD
Sbjct:   18 KAPVQETLLTPRFYTTDFDAVANL-----DISANETEIRAIVEELRADYNRHHFVRDEEFKQSWDHITGEKRRAFIDFLERSCTSEFSGFLLFKELSRRIKSRNPLLAEAFEFMARDEARHAGFLNKSMSD 143          
The following BLAST results are available for this feature:
BLAST of FC869307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF_PROM58.911e-4058.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM91.164e-3959.09Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM21.164e-3958.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM01.164e-3958.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROMS1.985e-3958.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_CYACA1.985e-3953.42Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNP61.681e-3850.93Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNE71.681e-3850.93Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_SYNY32.195e-3858.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_ANASP4.890e-3856.49Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionC31010G09EF AbioticL1 Citrus clementina cDNA clone C31010G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869307 ID=FC869307; Name=FC869307; organism=Citrus clementina; type=EST; length=716bp
AAGCCACTCAGTTTCCCTCTAGTACAAAAACTGGTTCCAGAAATGGCAGC
TGAGATGGCACTGGTCAAACTTGACCAGCAAATTCAGCACCATCGCCACC
ACTACTAAGCCTAGGTTCAGCTACCCGAAAGCAACATGTACATCTCTGAG
CACAAGATTTTGTACAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTG
CTGCCACTGCCCAAAAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAG
GAGACCCTTCTGACACCAAGGTTTTATACAACAGATTTTGATGAAATGGA
GACCCTTTTCAACACTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTG
AGGCATTGCTTCAAGAATTCAAGACTGATTATAACCAGACTCACTTTGTG
AGGAACAAGGAGTTCAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAG
GCAGATCTTTGTTGAGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTG
GTTTCCTTCTTTACAAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCA
GTGGTAGCTGAGATTTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGC
CGGGTTTCTGAACAAGGGGCTATCTGATTTCATTATGCATTGGACTTGGG
CTTCCTGACAAAGCTAGGAAATCACATTTTTCAAGCCAAAGTTATCTTTT
ATGCACATATTTATCT
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