FC869307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROMA (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus GN=acsF PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19 Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 245 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGL 622 + E LLTPRFYTT+F++ + EI +K +FEA+ +E + DYN HF R K E D++ + ++ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L Sbjct: 21 LDENLLTPRFYTTEFEKAAKT-DLEIARK----DFEAMFKEMEADYNLKHFDR-KASLERLDELSPEDKAVYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRAL 141
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM4 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9211) GN=acsF PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19 Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 245 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 628 + E LLTPRFYTT+FD+ + + ++ + +F+A+ E + DYN HF R +++ + ++ +L RS +EFSGFLL+KE+ R KK P + + F ++RDEARHAGFL + L + Sbjct: 23 LDENLLTPRFYTTEFDKA-----AKTDLEIARRDFQAMFNEMEADYNLKHFDRKASLARL-NELSPKDKSVYESYLVRSVVSEFSGFLLFKEISNRFKKAKRPELGQFFQFLARDEARHAGFLGRALKE 145
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROM3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9303) GN=acsF PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19 Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 245 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGL 622 + + LLTPRFYTT+FD+ T+++ + + +FEA+ +E + DYN HF R + AD + + I+ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L Sbjct: 23 LDDNLLTPRFYTTEFDKAA---KTDLD--IARKDFEAMFKEMEADYNLKHFDRKASLERLAD-LSPEDKAIYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRAL 143
BLAST of FC869307 vs. ExPASy Swiss-Prot
Match: ACSF_PROMM (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9313) GN=acsF PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 245 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGL 622 + + LLTPRFYTT+FD+ T+++ + + +FEA+ +E + DYN HF R K E ++ + I+ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L Sbjct: 23 LDDNLLTPRFYTTEFDKAA---KTDLD--IARKDFEAMFKEMEADYNLKHFDR-KASLERLSELSPEDKAIYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRAL 143 The following BLAST results are available for this feature:
BLAST of FC869307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869307 ID=FC869307; Name=FC869307; organism=Citrus clementina; type=EST; length=716bpback to top |