FC870246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.276e-16 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 D AGRLPGYG+ TNIINGG+ECG G + V +RIGF+ +C FG+ PG NLDC NQR + Sbjct: 266 DRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 197 +A+D AGR+PGYG+ TNIINGG+ECG+G +D V +RIGF+ +C G+ NLDC +QRP+G Sbjct: 261 SADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 +A D +A R PG G+ TNIINGGIECG G N AV +RIG++ +CG + PGDNLDC NQR + Sbjct: 187 SAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 230 DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L+ + +S Sbjct: 255 DVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.531e-16 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 D +AGRLPG+G+ TNIINGG+ECG G V++RIGF+ +C + G+NLDC+NQRP+G L+ ++ Sbjct: 245 DRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.531e-16 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 + +D AGR+PG+GL TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQR Y SM Sbjct: 249 SGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.245e-15 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 230 DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L + +S Sbjct: 254 DVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 +++D AGR GYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 230 SSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.773e-15 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 D AGR PG+G+ TNIINGG+ECG+G + V +RIGF+ +C G+ GDNLDC NQRP+ Sbjct: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.622e-15 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 +A D +A R PGYG+ TNIINGGIECG G N V +RIGF+ +C + PGDNLDC +QR + Sbjct: 181 SAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244 The following BLAST results are available for this feature:
BLAST of FC870246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870246 ID=FC870246; Name=FC870246; organism=Citrus clementina; type=EST; length=638bpback to top |