FC870253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 317 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 GP +PY GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP +PL + A MY+ +Y+ + + QKYA Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 317 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 GP +PY GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP +PL + A MY+ +Y+ + + QKYA Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 317 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 GP +PY GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP +PL + A MY+ +Y+ + + QKYA Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.091e-18 Identity = 53/156 (33.97%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 197 RVMASKRIL-KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 RV R+L KE+ +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N D+PL E A ++ DK +Y + + ++YA Sbjct: 29 RVSVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.955e-18 Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 197 RVMASKRIL-KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 R+ R+L KE+ +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N D+PL E A ++ DK +Y + + ++YA Sbjct: 29 RISVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17 Identity = 41/123 (33.33%), Postives = 72/123 (58.54%), Query Frame = 2 Query: 278 VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYA 640 V ++M + GPS++PY+GG++ V + P +YP+K P + F ++FHPNI+ +GS+CLD++ + WSP + + + + LL PN +PL E A + + + Y + R + +YA Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17 Identity = 48/143 (33.57%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 224 KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAM 643 ++ DL+++ +A PV+EDM W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L E+W+ T+S +LL++ +L++P + P+ E A + + D++ Y + R + + M Sbjct: 11 RDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILRLFNRPLQM 153
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17 Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTAR 619 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP++PL E A + +++ +E + Sbjct: 30 AQLRIQKDINELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.315e-17 Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSA---------GPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------KVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMY-MSDKAKYESTARSWTQKYA 640 KR+LKE + ++K+ S P+ + +F W A I GP SP+ ++ + I P +YP PPK+ F K+ HPN+N G ICLDIL+++WSPA T+ L++I LL +P P PL ++A++ D Y+ + KY+ Sbjct: 6 KRLLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYYIAKYS 181
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.315e-17 Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTAR 619 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP++PL E A + +++ +E + Sbjct: 30 AQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165 The following BLAST results are available for this feature:
BLAST of FC870253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870253 ID=FC870253; Name=FC870253; organism=Citrus clementina; type=EST; length=880bpback to top |