FC870253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARS 622 A KR+ KE K + ++PP A P +++ W I GP ++PY G + T+ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T DE I M +D K + A+S Sbjct: 6 AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT---TDE---SSIGTMESTDSTKRKYAAKS 139
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 2 Query: 209 SKRILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 520 +KRI KEL + P + S D+ + I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDII--KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 535 + KR+ KE K + +PP SA P E++ W I GP +P+ G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 2 Query: 251 PPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDEPLVPEIAHMYMSDKAKYESTARSWTQKY 637 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + ++ L + A M+ ++ + R + +Y Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 33/117 (28.21%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 547 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 33/117 (28.21%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 547 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 33/117 (28.21%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 547 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of FC870253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870253 ID=FC870253; Name=FC870253; organism=Citrus clementina; type=EST; length=880bpback to top |