FC870410

Overview
NameFC870410
Unique NameFC870410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.497e-28
Identity = 76/211 (36.02%), Postives = 117/211 (55.45%), Query Frame = 3
Query:  132 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 749
            S   ++A  AEF +TL +VF G+G+++ +       A  P  ++ +A+  G AL   V    +ISG HVNPAVTF   +G Q+++L    Y  AQLLG++  + +L  VT     G LA+ T         X    +EI +T   V  ++AT  + + G LG++A +A+GF +    L    ++G  MNPARSF PA+ + NF ++W+YWV
Sbjct:    6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNT--LHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWV 206          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.497e-28
Identity = 74/211 (35.07%), Postives = 115/211 (54.50%), Query Frame = 3
Query:  132 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 749
            S   ++A  AEF +TL +VF G+G+++ +          P  ++ +A+  G AL   V    +ISG HVNPAVTF   +G Q+++L    Y  AQLLG++  + +L  VT     G LA+ T              +EI +T   V  ++AT  + + G LG++A +A+GF +    L    ++G  MNPARSF PA+ + NF ++W+YWV
Sbjct:    6 SASFWRAIFAEFFATLFYVFFGLGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNT--LHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWV 206          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 83/213 (38.97%), Postives = 114/213 (53.52%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT----GGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEFI+TLLF++  V + I     T        GL+ IA   G  +FV V   A ISGGH+NPAVTFGL L  ++++   + Y +AQ LG+I    L+K         L    +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   + D+WI+WV
Sbjct:   35 YRAIIAEFIATLLFLYVTVATVIGHKNQTGPCG--GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWV 244          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 81/219 (36.99%), Postives = 116/219 (52.97%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKMTA------DAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEF++TLLF++  V + I +   T       DAA    G++ IA   G  +F+ V   A ISGGH+NPAVTFGL L  +++++  I Y +AQ LG++    L+K              +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV   N   + D WI+WV
Sbjct:   35 YRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWV 252          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 83/228 (36.40%), Postives = 121/228 (53.07%), Query Frame = 3
Query:  123 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS-----GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            D+  LG    ++A +AEFI+TLLF++  + + I +   T D AL+P      G++ IA   G  +F+ V   A ISGGH+NPAVTFGL L  ++T++  + Y +AQ LG+I    L+K              +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+       +  +WI+WV
Sbjct:   27 DATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQT-DPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWV 252          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 81/219 (36.99%), Postives = 116/219 (52.97%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEF++TLLF++  V + I +   T      ADAA    G++ IA   G  +F+ V   A +SGGH+NPAVT GL L  +++++  + Y  AQ LG+I    L+K     L        +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV   N   + D WI+WV
Sbjct:   38 YRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWV 255          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 80/219 (36.53%), Postives = 118/219 (53.88%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEF++TLLF++  V + I +   +      ADAA    G++ IA   G  +F+ V   A +SGGH+NPAVTFGL L  +++++  + Y +AQ LG+I    L+K       V      +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       + D+WI+WV
Sbjct:   41 YRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWV 258          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 83/219 (37.90%), Postives = 116/219 (52.97%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS------GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEFI+TLLF++  V + I +   T  AA  P       G++ IA   G  +F+ V   A ISGGH+NPAVTFGL L  +++++  + Y IAQ LG+I    L+K       V      +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       + D WI+WV
Sbjct:   41 YRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWV 258          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 82/219 (37.44%), Postives = 115/219 (52.51%), Query Frame = 3
Query:  144 FKAYLAEFISTLLFVFAGVGSAIAFNKM------TADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWV 749
            ++A +AEFI+TLLF++  V + I +         T DAA    G++ IA   G  +F+ V   A ISGGH+NPAVTFGL L  +++++  + Y IAQ LG+I    L+K              +              EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       + D WI+WV
Sbjct:   40 YRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWV 257          
BLAST of FC870410 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.873e-28
Identity = 74/211 (35.07%), Postives = 116/211 (54.98%), Query Frame = 3
Query:  132 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 749
            S   ++A  AEF +TL +VF G+G+++ +       A  P  ++ +A+  G AL   V    +ISG HVNPAVTF   +G Q+++L    Y  AQLLG++  + +L  VT     G LA+ T              +EI +T   V  ++AT  + + G +G++A +A+GF +    L    ++G  MNPARSF PA+ + NF ++W+YWV
Sbjct:    6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNT--LHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWV 206          
The following BLAST results are available for this feature:
BLAST of FC870410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
MIP_CAVPO4.497e-2836.02Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_CANFA4.497e-2835.07Lens fiber major intrinsic protein OS=Canis famili... [more]
PIP28_ARATH5.873e-2838.97Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ5.873e-2836.99Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ARATH5.873e-2836.40Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ5.873e-2836.99Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ5.873e-2836.53Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE5.873e-2837.90Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ5.873e-2837.44Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_MOUSE5.873e-2835.07Lens fiber major intrinsic protein OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1DA07ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1DA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870410 ID=FC870410; Name=FC870410; organism=Citrus clementina; type=EST; length=984bp
GGGGCTCGATCGAGATAAAACCTTATCTTCTTCTTCTTAAGAAAGACTCG
AGAGAGTTTTTTTTTCCCTATTCTCTAGCTCTTTCTTGATCAACAATGGC
TATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAGG
CCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGTT
GGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGATCC
ATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTGTCG
CAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGTC
ACCTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCTT
CTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTCA
AAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTGGA
GTTGGAGCCACTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTTT
GGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATTGG
GCACCATTGCACCCATTGCCATCGGTTTCATTGTCGGTGCCAACATCCTG
GCCGCCGGCCCATTCTCCGGTGGTTCCATGAACCCGGCCCGTTCCTTCGG
GCCTGCCGTTGCCAGCGGCAACTTTCAGGACAACTGGATCTACTGGGTTG
GCCCTCTCATTGGCGGTGGCCTTGCCGGGCTCATCTATGGCAATGTGTTC
ATGCACTCTGAACATGCACCCCTATCTAATGACTATTAATTAATTAGTTA
AACTTTGTTTAAAAGTTTAGTTAAATCATTTGATCACCTGCCTTTGGCTC
TTTCTTTTTTGTAAAAAAAGAAGGAAAAGCAGCTTTGGGCTCTTTCTTCT
TTTCTTCTTTAAAAAAAAAAAAAAAAAAAAAAAA
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