FC870544

Overview
NameFC870544
Unique NameFC870544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length838
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1B_HUMAN (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Homo sapiens GN=ARD1B PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR    +DL+     NL  L E + M +Y+ +   WP   ++AE    +I+GY++ K+E + +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN PA+ +Y   L + I     +YY+  ED    ++ LS+
Sbjct:    3 IRNAQPDDLMNMQHCNLLCLPENYQMKYYLYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEEPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRPALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLSQ 153          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1_SCHPO (N-terminal acetyltransferase A complex catalytic subunit ard1 OS=Schizosaccharomyces pombe GN=ard1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.830e-15
Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW--HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMY-EKLGYVIYRRVLRYYSGEEDGLDTRKALSRDVEKKSIIPLKRPVTPDEL 626
            IR    +DL    + NL +L E + + +Y+ +   WP   +VA  P  R++GY++ K+E + +    HGH+T+V+V   YR   LAK+LM   +    ++  A ++ L VR SN  AI +Y + L + +     +YY+  ED      A+ +D    S +    P T DEL
Sbjct:    3 IRPARISDLTGMQNCNLHNLPENYQLKYYLYHAISWPMLSYVATDPKGRVVGYVLAKMEEEPKDGIPHGHITSVSVMRSYRHLGLAKRLMVQSQRAMVEVYGAKYMSLHVRKSNRAAIHLYRDTLQFDVQGIESKYYADGEDAY----AMHKDF---STLKFDTPETNDEL 166          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1B_MOUSE (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Mus musculus GN=Ard1b PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR    +DL+     NL  L E + M +Y  +   WP   ++AE    +I+GY++ K+E   +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN  A+ +Y   L + +     +YY+  ED    ++ LS+
Sbjct:    3 IRNARPDDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFGAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDLSQ 153          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1A_MOUSE (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Mus musculus GN=Ard1a PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR     DL+     NL  L E + M +Y  +   WP   ++AE    +I+GY++ K+E   +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN  A+ +Y   L + I     +YY+  ED    ++ L++
Sbjct:    3 IRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQ 153          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1A_HUMAN (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Homo sapiens GN=ARD1A PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR     DL+     NL  L E + M +Y  +   WP   ++AE    +I+GY++ K+E   +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN  A+ +Y   L + I     +YY+  ED    ++ L++
Sbjct:    3 IRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQ 153          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1A_BOVIN (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Bos taurus GN=ARD1A PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR     DL+     NL  L E + M +Y  +   WP   ++AE    +I+GY++ K+E   +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN  A+ +Y   L + I     +YY+  ED    ++ L++
Sbjct:    3 IRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQ 153          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1_DICDI (N-terminal acetyltransferase complex ARD1 subunit homolog OS=Dictyostelium discoideum GN=natA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  114 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMY-EKLGYVIYRRVLRYYSGEEDGLDTRKALSRDVEKK 584
            M +IR     DL+   + NL  L E + M +Y+ +   WP    VAE     ++GY++ K++ + E   GH+T++ V    R+  +A KLM   E    ++  A  V L VR SN  A  +Y E L + I      YY  +ED       L  +VE++
Sbjct:    1 MVSIRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVAEDDKGNVVGYVLAKID-ENEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHEVLKFKIDEIEKEYYGDKEDAYSMVLYLKPEVEEE 157          
BLAST of FC870544 vs. ExPASy Swiss-Prot
Match: ARD1B_RAT (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Rattus norvegicus GN=Ard1b PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  123 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESW-HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEK-LGYVIYRRVLRYYSGEEDGLDTRKALSR 569
            IR     DL+     NL  L E + M +Y  +   WP   ++AE    +I+GY++ K+E   +   HGH+T++ V   +RR  LA+KLM+       +   A +V L VR SN  A+ +Y   L + +     +YY+  ED    ++ L++
Sbjct:    3 IRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFSAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDLAQ 153          
The following BLAST results are available for this feature:
BLAST of FC870544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ARD1B_HUMAN2.617e-1532.45N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1_SCHPO5.830e-1531.58N-terminal acetyltransferase A complex catalytic s... [more]
ARD1B_MOUSE1.436e-1331.13N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_MOUSE1.436e-1331.13N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_HUMAN1.436e-1331.13N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_BOVIN1.436e-1331.13N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1_DICDI2.449e-1331.01N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1B_RAT2.449e-1330.46N-terminal acetyltransferase complex ARD1 subunit ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CH02ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870544 ID=FC870544; Name=FC870544; organism=Citrus clementina; type=EST; length=838bp
GGGGGTGCAAAAACGGTTTATGTAAGCCAATCGGAGTTACCATTTCTTAT
CTGGCCGTCCCGTTTAACGTCAGTTTCCGAGCTCGAAGTTTCTTTGTCCC
AAATTCCAGAAAGATGACGACGATTCGCAGATTTTGCTGCAACGATCTTC
TCCGTTTCACCTCTGTTAATCTTGACCACCTCACTGAAACTTTCAATATG
TCATTCTACATGACTTATTTGGCAAGATGGCCCGATTATTTCCACGTCGC
CGAAGGCCCTGGCAACCGGATCATGGGTTACATTATGGGAAAAGTTGAAG
GACAGGGTGAATCTTGGCATGGTCATGTTACTGCAGTAACAGTTTCTCCA
GAATACCGCAGGCAGCAACTGGCCAAGAAACTTATGAACCTGCTAGAAGA
CATCAGTGACAAGATTGATAAGGCTTACTTTGTGGATCTTTTTGTGAGAG
CTTCAAACACACCGGCCATAAAAATGTATGAAAAGCTCGGATATGTAATC
TATAGACGGGTTCTACGCTATTATTCTGGGGAAGAAGATGGGTTAGATAC
GAGGAAAGCATTATCTCGAGATGTTGAAAAGAAATCCATCATTCCCCTCA
AACGGCCAGTCACACCCGATGAGTTAGAGTATGATTAGCTTTGTTTTCCA
TGTTCTTTTCTGCCAAGTCAACTTGATGAACACTTGCAACTTGCATGTAA
TTTTGGAAATGCAGAGGTTTTAGGCATATTATGTAAGTGTGATATTTGGG
ATCGTATTTCCTACAAATACTTTGTCAGCTTCAGAAGGGTGACTTATTTT
TACTTCTGTTTTCCAGTAAAAAAAAAAAAAAAAAAAAA
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