FC870593

Overview
NameFC870593
Unique NameFC870593
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length812
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G1_DROME (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila melanogaster GN=eIF3-S4-1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17
Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  216 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFGD+  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++    MR R+D  ++R++NLSE   E
Sbjct:   30 ENGQKYVTEYKYNKDDKKTKV---VRTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRIC--NGEHWSVNCPYKGTAMDT-NMMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRISNLSESMTE 201          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G1_DROPS (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  216 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S  TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  MR R+D  ++R++NLSE   E
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKV---VRTYKISKQVVPKTVAKRRTWTKFGESKSDKPGPNSHTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRIC--NGEHWSVNCPYKGTAMDT-NLMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGLGMRGRDDTAAIRISNLSESMTE 201          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G1_DROPE (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila persimilis GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  216 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S  TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  MR R+D  ++R++NLSE   E
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKV---VRTYKISKQVVPKTVAKRRTWTKFGESKSDKPGPNSHTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRIC--NGEHWSVNCPYKGTAMDT-NLMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGLGMRGRDDTAAIRISNLSESMTE 201          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G1_DROGR (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila grimshawi GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 61/188 (32.45%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  216 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            ENG K V EYK+N D  K K+    R  K+    + K   +RR WAKFG++  +  G  S+ TMVS E+I+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  +R R+D  ++R++NLSE   E
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKV---VRTYKITKQVVPKTVAKRRTWAKFGESKNDKPGPNSQTTMVS-EDIIMQFINS-----KEDEKANDPLLDPSKN---IAKCRIC--NGEHWSVNCPYKGTAMDT-NLMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGMGIRGRDDTAAIRISNLSESMTE 201          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EIF3G_SCLS1 (Eukaryotic translation initiation factor 3 subunit G OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif35 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17
Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  192 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAP---------AETFIDKPXXXXXXXXXXXXTKGTYVPPGMR----AGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            P+     +++G + ++ ++FNDDG KVK     R  K+    ++ R  ER++W KFG + ++  G      S  E ++ RP     K +  +   D+ A   K     + CR C   G+H+T++CPFK   AP         A    D P             K +YVPP +R    AG ER G     R+D  ++RVTN+SE   E
Sbjct:   23 PQSTTTTNKDGTQTIVTWRFNDDGKKVKTTRRIRFTKVKEI-VNPRVAERKSWGKFGLSQKDAAGPASDTTSVGENIIFRPSTNWRK-DAKEEVSDAGAMKNKLKDKQVKCRIC--SGEHFTAKCPFKGTMAPLGEEGAVDVAAGHADTPEGPGGLGAG----KSSYVPPHLRNGGAAGGERMGGGKFERDDLATLRVTNVSEMAEE 221          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EIF3G_BOTFB (Eukaryotic translation initiation factor 3 subunit G OS=Botryotinia fuckeliana (strain B05.10) GN=tif35 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17
Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  192 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAP---------AETFIDKPXXXXXXXXXXXXTKGTYVPPGMR----AGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            P+     +++G + ++ ++FNDDG KVK     R  K+    ++ R  ER++W KFG + ++  G      S  E ++ RP     K +  +   D+ A   K     + CR C   G+H+T++CPFK   AP         A    D P             K +YVPP +R    AG ER G     R+D  ++RVTN+SE   E
Sbjct:   23 PQSTTTTNKDGTQTIVTWRFNDDGKKVKTTRRIRFTKVKEI-VNPRVAERKSWGKFGLSQKDAAGPASDTTSVGENIIFRPSTNWRK-DAKEEVSDAGAMKNKLKDKQVKCRIC--SGEHFTAKCPFKGTMAPLGEEGAVDVAAGHADTPEGPGGLGAG----KSSYVPPHLRNGGTAGGERMGGGKFERDDLATLRVTNVSEMAEE 221          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G2_DROYA (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila yakuba GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17
Identity = 64/192 (33.33%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  216 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRE 773
            E   K V EYKFNDDG KVK+    R  K+    + K    RR+W KFGD+  +  G +  T +++EEI ++     GSK  E     ++    GK    +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G    G       R R+D ++VR++NLSE   E
Sbjct:   28 EGDYKYVTEYKFNDDGKKVKV---VRTFKIEKQIVPKAVARRRSWVKFGDSRLDKPGPNSQTTMASEEIFMQ---FIGSK--EFDQTHETQLDPGKN---IAKCRIC--NGEHWSVNCPYKGTSMDSKTMMETKANAAAAAAISDPSKTGKYVPPFMKDGGGGPGGKNWGRGRERDDSSAVRISNLSESMTE 206          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EIF3G_ASPNC (Eukaryotic translation initiation factor 3 subunit G OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif35 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16
Identity = 63/206 (30.58%), Postives = 95/206 (46.12%), Query Frame = 3
Query:  192 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPG--SKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKG-------TYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRE 773
            P Q I  +++G K ++ Y+FND+G KVK+    +   +    ++ +  ERR+WAKFG       G      S  E ++ RP         E  K  G+  +   +     + CR C   G+H+T+RCPFKD  AP    +D+P              G       +YVPP +R GA   G  M     ++D  ++RVTN+SE   E
Sbjct:   23 PPQQITTNKDGTKTIVSYRFNDEGKKVKVTRRIKT-TVVREHVNPQVAERRSWAKFGLEKGNAPGPSFDTTSVGENIVFRPSVNWKLQAAEAEKNGGEKGSVKDQLKDKKVKCRIC--SGEHFTARCPFKDTMAP----VDEPTAGGEAGDEDSPAAGALGAGTSSYVPPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEE 221          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EI3G2_DROVI (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila virilis GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16
Identity = 64/196 (32.65%), Postives = 96/196 (48.98%), Query Frame = 3
Query:  189 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRE 773
            P K+ +  D    K V EYKFND+G K+K+    ++ K     +S+   +RRNW KFGD+  +  G +  T    +EIL+      GSK  + + A D L      G  +  CR C   G+HW+ +CP+K  +   E+   K               G YVPP ++ GA+      R R+D ++VR++NLSE   E
Sbjct:   22 PSKEYVDGD---YKHVTEYKFNDEGKKIKVVRSFKIEKKI---VSRAVAKRRNWVKFGDSKLDKPGPNSYTTKVADEILM---NYMGSK--DFEHAQDPL----DAGKPMAKCRIC--NGEHWSVKCPYKGTSMDMES---KAIAAATAAVGETNKTGKYVPPFLKDGAKG-----RERDDSSAVRISNLSESMTE 192          
BLAST of FC870593 vs. ExPASy Swiss-Prot
Match: EIF3G_USTMA (Eukaryotic translation initiation factor 3 subunit G OS=Ustilago maydis GN=TIF35 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16
Identity = 66/199 (33.17%), Postives = 88/199 (44.22%), Query Frame = 3
Query:  219 NGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKD-LAAPAETFIDKP-----------XXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM-----RRRNDENSVRVTNLSED 764
            NGVK VIEY+ N DG K+KI    + R L   +++    ER+ W KFG    +  G      +  E ++ +  A     E      D + Q      +  VCR C  KGDH+T++CP+KD L A      D P                         G YVPP MR GA+  G  M       R+D  ++RVTNLSED
Sbjct:   42 NGVKVVIEYRTNPDGKKIKITRRVK-RTLVKTKVNHEVAERKTWTKFGQEKGKAAGPHSATTTIGENVVLKMSAGNKTAEPEVDDMDKMRQQLANKRI--VCRLC--KGDHFTTKCPYKDTLEAIPGAGADTPEGGDGSMTPLAGMDPTNPAVAASAGGKYVPPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSED 235          
The following BLAST results are available for this feature:
BLAST of FC870593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
EI3G1_DROME4.535e-1732.98Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROPS5.923e-1732.98Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROPE5.923e-1732.98Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROGR5.923e-1732.45Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_SCLS17.735e-1730.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_BOTFB7.735e-1730.43Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROYA7.735e-1733.33Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ASPNC1.010e-1630.58Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROVI1.010e-1632.65Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_USTMA1.319e-1633.17Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AD04ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2AD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870593 ID=FC870593; Name=FC870593; organism=Citrus clementina; type=EST; length=812bp
GGGGTTTCACAAAAAATCGAAATCTCAAACCCTAAAACGCTTTGTCTCGC
AACCTCTCCAACGCTTGTGTTTTTCTTAATCTGATTCATTCGAAAAAGAT
GTCGGTTTCGACTCAAAATCCGACCCAACCAAAGCTCCGTTGGAGCGAAC
TGGACGAAGAAGACGGCGAGGATTTGGACTTCCTGCTGCCGCCTAAACAA
GTGATCGGCCCCGACGAGAACGGAGTCAAGAAAGTTATTGAATACAAGTT
TAACGATGACGGCAATAAGGTCAAAATAACCACCACCACGCGCGTGCGCA
AGCTCGCTAACGCTCGTCTCAGCAAACGCGCGCTGGAGAGGAGAAACTGG
GCCAAGTTCGGCGACGCCGTTCGCGAAGACGTCGGTAGCAGACTTACCAT
GGTCTCCACCGAAGAGATCTTGCTGGAACGGCCTAGGGCTCCTGGTAGCA
AACCAGAAGAGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAA
GGTGGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCA
CTGGACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACAT
TCATTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCG
ACCAAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAAC
TGGAACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCA
ACCTATCGGAGGACACTCGGGAAACCTGACTTGCTTGAGCTCTTCCGGCC
TTTTGGTGCTGT
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