FC870674

Overview
NameFC870674
Unique NameFC870674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length787
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: EKI1_YEAST (Ethanolamine kinase OS=Saccharomyces cerevisiae GN=EKI1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13
Identity = 59/216 (27.31%), Postives = 103/216 (47.69%), Query Frame = 1
Query:  208 DSDALQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIH-ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKAL-----LWDRLRRWVSVAKSF---------------CSA-----KDAKEFCLYTLKDE--ISMLEKE-----LPNDHQEIGFCHNDLQYGNIMIDEK 756
            + + L +  +KGA+TN +Y+I +P      +  +L+RI+G+ ++   +R+ E++    +S    GP+L G F +GR E++I  +RT + AD  D   S  +A K++E H   +P   K +      W    +W+ +  S                CS+     K  K +  +   D    S L +E     + N   ++ FCHNDLQ+GN++   K
Sbjct:  131 NKNLLTLTQIKGALTNVIYKIHYPN-----LPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELH-CTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSK 340          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKA_HUMAN (Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12
Identity = 56/208 (26.92%), Postives = 94/208 (45.19%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWPAKNNGL---VRNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRRWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE 753
            D   +  ++G ++N ++Q + P     L    R VL+R+YG          EG E     ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++  P IS  +A KM  FH +KMP       L+  + +++         ++++     +   Y L  E+  L   L +    + FCHND Q GNI++ E
Sbjct:  109 DEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLE 316          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: EKI1_MOUSE (Ethanolamine kinase 1 (Fragment) OS=Mus musculus GN=Etnk1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  307 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP--RKALLWDRLRRWVS-VAKSFCSAKDAKEFCL-----YTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEKTSSITII 777
            VLVRIYG   E+  +RD+E+++F  + + G  P+L   F +G   EFI    L    + +P I  L+A ++ + H +        K+ LW ++ ++ S +   F      K F         L++E++ +++ L +    +  CHNDL   NI+ +EK   +  I
Sbjct:  124 VLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGELLDPQHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADENINKRFLSEIPSPQLLQEEMTWMKELLSSLGSPVVLCHNDLLCKNIIYNEKQGDVQFI 288          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: KICB1_CAEEL (Choline kinase B1 OS=Caenorhabditis elegans GN=ckb-1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 56/215 (26.05%), Postives = 99/215 (46.05%), Query Frame = 1
Query:  178 VASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRRWVSVAK------------SFCSAKDAKEFCLYTLKDEISMLEK---ELPNDHQEIGFCHNDLQYGNIMIDEKTSSITII 777
            +  +W +V    + ++V  + G  +N ++ +     ++      L+RI+ +G    F    +   F   S +G GP+L G F  GR+EEF+ +RTL +  I DP+IS  V A   ++H + +P  +K   +  +R  +   +            +   ++  K+  +  L  EI  +EK   EL  D   + FCHNDL   NI+    T  + +I
Sbjct:   30 LGGEWKNV--KKNEVKVTTILGGQSNHMFHVT----SSTSATPYLLRIHRQGPSHVFM---DTVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCILDPEISRRVGAVYPKYHAIDVPVSKKRRCFQVMRESLKEYQDLGGGDYEIKPTTVTYSEHPKKISMDDLYKEIDFMEKWTNELFED--TVVFCHNDLASSNILELNSTKELVLI 233          
The following BLAST results are available for this feature:
BLAST of FC870674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
EKI1_YEAST4.921e-1327.31Ethanolamine kinase OS=Saccharomyces cerevisiae GN... [more]
CHKA_HUMAN1.096e-1226.92Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 ... [more]
EKI1_MOUSE1.870e-1227.88Ethanolamine kinase 1 (Fragment) OS=Mus musculus G... [more]
KICB1_CAEEL4.606e-1126.05Choline kinase B1 OS=Caenorhabditis elegans GN=ckb... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AH12ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2AH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870674 ID=FC870674; Name=FC870674; organism=Citrus clementina; type=EST; length=787bp
GGGGGGCCTTGCTTTCATCCTTCTTGACAACTCAGTTTTTCTCTTCCTCT
TAGGTGAAGTTTTTAATTTTCGTTGCAATCACCACTTTGTGCTGAGCTGA
CTACAAGAAAGGCTATAAAGACAACTGAATTGTTACCAAGTTCTTCTCCA
GAAGAATTAAAGAAAGTTCTTCAATCAGTTGCTTCCGACTGGGGAGATGT
TATCGATGATTCGGATGCATTGCAGGTGATTCCATTAAAAGGTGCAATGA
CTAATGAGGTTTACCAAATAGCGTGGCCTGCAAAAAATAATGGTCTTGTT
AGAAACGTTTTGGTCCGGATTTATGGAGAAGGCGTCGAGGTTTTCTTCAA
TAGGGATGATGAAATTAGAACCTTTGAGTGCATGTCAAGCCAAGGCCAGG
GGCCCAGGCTTCTCGGGCGGTTCGGTGATGGAAGAGTTGAGGAGTTCATT
CATGCCAGGACACTGTCGGCTGCTGACATCCGTGACCCCAAAATCTCTGA
GTTGGTAGCGGCAAAGATGAGAGAATTTCATGATCTCAAAATGCCTGGTC
CAAGGAAAGCACTACTATGGGACAGACTGAGGAGATGGGTTAGTGTGGCC
AAAAGTTTCTGTTCTGCTAAAGATGCAAAGGAATTCTGCTTGTATACTCT
GAAGGATGAAATCAGTATGCTGGAGAAAGAGTTGCCAAATGACCATCAAG
AGATTGGCTTTTGTCACAATGATCTTCAGTATGGAAACATTATGATTGAC
GAAAAGACCAGCTCAATTACTATAATTGTAAGTTTTA
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