FC870833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: PHOR_BACSU (Alkaline phosphatase synthesis sensor protein phoR OS=Bacillus subtilis GN=phoR PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16 Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 5 GEVLNLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKL 490 GE+ L+K A K + + LN+ D P+Y GD RL Q LN+V NA+ +T EG G VA + R+ ++++V DSG GI ++IP +F +F + RNS G+GLGLAI K + EG I + SE LG+G +F V L Sbjct: 433 GEIETLLKHKADEKGISLHLNVPKD-PQYVSGDPYRLKQVFLNLVNNALTYTPEG-----GSVAINVKPREKD--------------IQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAIVKHLIEAHEGKIDVTSE-LGRG--TVFTVTL 571
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKL_DICDI (Hybrid signal transduction histidine kinase L OS=Dictyostelium discoideum GN=dhkL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 74 PDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNL-MEGHIWIESE-GLGKGCTAIFIVKLGIPEHSND 514 P +P +G RL Q L N++GN++KFT +G ISI L D ++ + ++V VRD+G GI + +P LF F Q + R GSGLGLAICK V+L G I +ES+ G G T I K +P S + Sbjct: 934 PKIPNILIGPSSRLNQILTNLLGNSLKFTDKGEISICCL------LNDET---------DSEYEIKVDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVHLAFNGEISVESQYGHGSTFTCILKFKKFLPSDSQN 1067
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKB_DICDI (Hybrid signal transduction histidine kinase B OS=Dictyostelium discoideum GN=dhkB PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 44 KKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIP 499 K L + + + P++P GD++R+ Q LLN + N++KFT G I I + +S H ++ V DSG GI + + LF F+Q + R G+GLGL+I KR +M G + ++SE G G T F + GIP Sbjct: 1054 KGLDLCIFIDPNVPVIVNGDQRRIKQILLNFLSNSIKFTNHGQIIIRVKLESDDS---------------THSLIKFDVEDSGIGIKTEHLNQLFASFSQIDSGNSRKYQGTGLGLSISKRLCKMMGGDVKVKSE-FGVGSTFSFTIPCGIP 1189
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKD_DICDI (Hybrid signal transduction histidine kinase D OS=Dictyostelium discoideum GN=dhkD PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 2 Query: 35 ASVKKLLVALNLAPDLPEYA------VGDEKRLMQTLLNVVGNAVKFTKEG-----NISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPC 547 A KK+ V N+ + E + VGD+ RL Q + N++ N++KFTKE N+ + + E L P F + ++ + D+G GI Q +P++F +F Q + R+ G G+GL+I + ++L +G ++ SEG KG + F V L I + S+ SN S ++ C Sbjct: 846 AQSKKISVHSNIQGEGEEESSILRNIVGDKARLQQVIWNLLSNSIKFTKEKGRIHLNLKVVNQIPSREVLGFCSNPMFNTINRHGDRWILFTITDNGKGIPKQFLPSVFDRFKQADCSSTRSYGGLGIGLSITQNIIHLHKGAVYANSEGENKG--SQFTVVLPIIKGSSSSNSSPSNQLSC 1025
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DOKA_DICDI (Hybrid signal transduction protein dokA OS=Dictyostelium discoideum GN=dokA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 58/146 (39.73%), Postives = 70/146 (47.95%), Query Frame = 2 Query: 80 LPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIES---EGLGKGCTAIFIVKLGIPEHS 508 +P GD L + LLN+VGNAVKFT+ TGFV S + LR V+DSG GI I +F F Q R GSGLGL+ CK V LM G+I +ES EG GKG T F +K+ I S Sbjct: 1151 VPPVIFGDRNSLKKVLLNLVGNAVKFTE------TGFVLLEISTDYESGDQIS---------LRFTVKDSGIGIPENKIEQIFVPFGQIDGSFSRKYGGSGLGLSFCKELVALMGGYIRVESGDQEG-GKGTTFWFAIKVSISSPS 1280
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: TCSA_EMENI (Two-component system protein A OS=Emericella nidulans GN=tcsA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14 Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 2 Query: 68 LAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLG 493 ++P LP GD R Q L N+VGNAVKFT++G+I + + E DS +R +V D+G G+ I LFT F++ A R G+GLGL+ICK LM+G + G F K+G Sbjct: 401 ISPKLPTRMRGDPLRYRQVLQNLVGNAVKFTEKGSIHVKITSSTDEEDSDSSV-------------VRTEVTDTGIGVPDSAINTLFTPFSRFANSAARKYQGTGLGLSICKSLAELMDGSVGYSPNPNASGSVFWFTAKMG 529
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: RCSC_ECOLI (Sensor kinase protein rcsC OS=Escherichia coli (strain K12) GN=rcsC PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14 Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 8 EVLNLIK----PIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESE-GLGKGCT 469 EV+N I P+ K+L + + PD+P GD RL Q + N++ NA+KFT G I + RA + YL ++VRD+G GI +++ LF F Q RN G+GLGLAIC++ +++M+G I ++SE G+G T Sbjct: 547 EVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVL-----------HVRA---------DGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFT 685
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: RCSC_SALTY (Sensor protein rcsC OS=Salmonella typhimurium GN=rcsC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13 Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 8 EVLNLIK----PIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESE-GLGKGCT 469 EV+N I P+ K+L + + PD+P GD RL Q + N++ NA+KFT G I + V + YL ++VRD+G GI +++ LF F Q RN G+GLGLAIC++ +++M+G I ++SE G+G T Sbjct: 547 EVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLH-------------------VRCDGD-YLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFT 685
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: RCSC_SALTI (Sensor protein rcsC OS=Salmonella typhi GN=rcsC PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13 Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 8 EVLNLIK----PIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESE-GLGKGCT 469 EV+N I P+ K+L + + PD+P GD RL Q + N++ NA+KFT G I + V + YL ++VRD+G GI +++ LF F Q RN G+GLGLAIC++ +++M+G I ++SE G+G T Sbjct: 547 EVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLH-------------------VRCDGD-YLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFT 685
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKJ_DICDI (Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum GN=dhkJ PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 35 ASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIF 478 A K + + ++A D+P+ +GD RL Q + N+VGNA+KFT +G + + V KS S L+ V D+G GI + +F F+Q R G+GLGL I R V LM+G + + S+ GKG T F Sbjct: 1437 AHQKCIELVCDIASDVPDSLIGDPGRLRQIVNNLVGNAIKFTSQGEVDLVVKVEKSLSC--------------GEVVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMKGKLSVVSKS-GKGSTFEF 1569 The following BLAST results are available for this feature:
BLAST of FC870833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870833 ID=FC870833; Name=FC870833; organism=Citrus clementina; type=EST; length=713bpback to top |