FC870833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKK_DICDI (Hybrid signal transduction histidine kinase K OS=Dictyostelium discoideum GN=dhkK PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13 Identity = 45/161 (27.95%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 8 EVLNLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKL 490 ++ +++ A+ K + ++ ++ +P +GD R++Q L+N+ GNA+KFT+ G + I + + ES S + + + +V+D+G G+ + +F F Q R GSGLGL +C + V LM+G I + + G T FI+ L Sbjct: 898 QICHVLSGQANEKNIHLSCEVSDKIPSILLGDSGRILQILMNLTGNALKFTQSGYVKIIIDLIEEESELVSLK--------KGEYNISFRVKDTGIGVPVESHQKIFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCDGSTFWFILPL 1050
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: DHKF_DICDI (Hybrid signal transduction histidine kinase F OS=Dictyostelium discoideum GN=dhkF PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13 Identity = 50/164 (30.49%), Postives = 78/164 (47.56%), Query Frame = 2 Query: 44 KKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIP 535 K + +A + D+P +GD RL+Q +LN+ NAVK+T G+I V E +N +++ + DSG GI +LF F Q + + R GSGLGLAI + LM G + +E G G ++F V L + +++ S +P Sbjct: 412 KPIEIAFLMDTDIPHRLIGDPNRLIQIMLNMGTNAVKYTDRGHIVFRISVISRE---------------QNRCKIKISIDDSGIGIGEDQRAHLFEPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEVILERSKPGVG--SLFSVTLNFEQIGSNTLKSLLP 558
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBVY (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio vulnificus (strain YJ016) GN=luxQ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 17 NLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCT 469 N+ +PI K + ++ L D+ RL Q + N++ NAVKFT G I ++ K E S H L +QV D+G GI + ++F F Q +++ R GSGLGL I K V ++EG I ++SE L KG T Sbjct: 568 NIYRPICREKGVSFEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRIEVS---FKLEQFARSE-----------HSILSIQVSDTGIGIDESKLESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSE-LCKGST 703
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBVU (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio vulnificus GN=luxQ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 2 Query: 17 NLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCT 469 N+ +PI K + ++ L D+ RL Q + N++ NAVKFT G I ++ K E S H L +QV D+G GI + ++F F Q +++ R GSGLGL I K V ++EG I ++SE L KG T Sbjct: 568 NIYRPICREKGVSFEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRIEVS---FKLEKFARSE-----------HSILSIQVSDTGIGIDESKLESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSE-LCKGST 703
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: EVGS_ECOLI (Sensor protein evgS OS=Escherichia coli (strain K12) GN=evgS PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 56 VALNLAPDLPEYAVG--DEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESE-GLGKGCTAIFIVKL 490 +AL+ + PE+ + D + Q L N++ NA+KFT EG + IT + + +NH +++ + DSGSG+S ++ LF +++Q A R +GSGLGL ICK + M+G + +ES G+G T V++ Sbjct: 808 IALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHID---------------DNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTS--AGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEI 938
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: EVGS_ECO57 (Sensor protein evgS OS=Escherichia coli O157:H7 GN=evgS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12 Identity = 46/148 (31.08%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 56 VALNLAPDLPEYAVG--DEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESE-GLGKGCTAIFIVKL 490 +AL+ + P++ + D + Q L N++ NA+KFT EG + IT + + +NH +++ + DSGSG+S ++ LF +++Q A R +GSGLGL ICK + M+G + +ES G+G T V++ Sbjct: 808 IALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLVHID---------------DNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTS--AGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEI 938
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: RPFC_XANCP (Sensory/regulatory protein rpfC OS=Xanthomonas campestris pv. campestris GN=rpfC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 56/173 (32.37%), Postives = 77/173 (44.51%), Query Frame = 2 Query: 5 GEVLNLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNL 523 G V +++P A ++L +A D+P+ GD L Q LLN+VGNAVKFT+ G++ LR +R E+ LR V D+G G+ P LF F Q R G+GLG I K V M G I + E G F + + I E S + Sbjct: 220 GSVNLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHV----------LLRVTRVSG----SAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFK-ENQPSGSVFWFELPMAIGEPLKSSTV 377
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: RPFC_XANC8 (Sensory/regulatory protein rpfC OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rpfC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 56/173 (32.37%), Postives = 77/173 (44.51%), Query Frame = 2 Query: 5 GEVLNLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNL 523 G V +++P A ++L +A D+P+ GD L Q LLN+VGNAVKFT+ G++ LR +R E+ LR V D+G G+ P LF F Q R G+GLG I K V M G I + E G F + + I E S + Sbjct: 220 GSVNLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHV----------LLRVTRVSG----SAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFK-ENQPSGSVFWFELPMAIGEPLKSSTV 377
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBHA (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio harveyi GN=luxQ PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 49/164 (29.88%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 17 NLIKPIASVK--KLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPE 502 N+ +PI + K +L++ L P++ + D+ RL Q L N+V NAVKFT G+I + + + +S L V++ D+G GI + +F F Q ++ R GSGLGL I K V+++EG + + S KG F++ L + + Sbjct: 567 NIYRPICTNKGVELVIENELDPNVEIFT--DQVRLNQILFNLVSNAVKFTPIGSIRLHAELEQFYGAENS--------------VLVVELTDTGIGIESDKLDQMFEPFVQEESTTTREYGGSGLGLTIVKNLVDMLEGDVQVRS---SKGGGTTFVITLPVKD 711
BLAST of FC870833 vs. ExPASy Swiss-Prot
Match: ARCB_HAEIN (Aerobic respiration control sensor protein arcB homolog OS=Haemophilus influenzae GN=arcB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 8 EVLNLIKPIASVKKLLVALNLAPDLPEYAVGDEKRLMQTLLNVVGNAVKFTKEGNISITGFVAKSESLRDSRAPEFFPVPIENHFYLRVQVRDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLM 421 ++ N +A K L+ +L L P+LP + D RL Q L N++ NAVKFT +GNI + + +R+ F V+D+G GISP++ ++F + Q + + + S+GSG+GLAI K LM Sbjct: 203 DIYNFASFLAKEKNLIFSLELEPNLPNWLNLDRVRLSQILWNLISNAVKFTDQGNIIL-------KIMRNQDCYHFI-------------VKDTGMGISPEEQKHIFEMYYQVKE-SRQQSAGSGIGLAISKNLAQLM 319 The following BLAST results are available for this feature:
BLAST of FC870833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870833 ID=FC870833; Name=FC870833; organism=Citrus clementina; type=EST; length=713bpback to top |