FC870866

Overview
NameFC870866
Unique NameFC870866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_AJECG (Calmodulin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=CAM1 PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.176e-67
Identity = 123/149 (82.55%), Postives = 141/149 (94.63%), Query Frame = 2
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MAD LT++Q+SE+KEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.176e-67
Identity = 122/149 (81.88%), Postives = 142/149 (95.30%), Query Frame = 2
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MA++L+++QI+EFKEAFSLFD+DGDGCITT ELGTVMRSLGQNPTEAELQDM+ EVDADG+GTIDFPEFL+LMARKM+D+DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMI+EAD + DGQ+NYEEFV++M  K
Sbjct:    1 MAERLSEEQIAEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMTEK 149          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.176e-67
Identity = 125/138 (90.58%), Postives = 133/138 (96.38%), Query Frame = 2
Query:   83 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 138          

HSP 2 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   71 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 277
            D   E +EAF +FDKDG+G I+  EL  VM +LG+  T+ E+ +MI E D DG+G +++ EF+ +M  K
Sbjct:   70 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 138          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALL3_MOUSE (Calmodulin-like protein 3 OS=Mus musculus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.176e-67
Identity = 121/149 (81.21%), Postives = 140/149 (93.96%), Query Frame = 2
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITT+ELGTVMRSLGQNPTEAELQ M+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTQELGTVMRSLGQNPTEAELQGMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTKLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CML1_ORYSJ (Calmodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=CML1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.620e-67
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 2
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQL+++QI EF+EAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMI+EVD D NG I+F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISA ELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:    1 MADQLSEEQIGEFREAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDTDSNGNIEFKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          

HSP 2 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 2
Query:   50 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 304
            MA +L D D   E KEAF +FDKD +G I+  EL  VM ++G+  T+ E+ +MI+E D DG+G I++ EF+  M  K +    EE+
Sbjct:   73 MARKLRDKDSEEELKEAFRVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAKKRRKRIEEK 158          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.838e-67
Identity = 124/147 (84.35%), Postives = 136/147 (92.52%), Query Frame = 2
Query:   56 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            ++LT++QI+EFKEAFSLFDKDGDG ITT ELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDF EFL +MA+KMKDTD+EEE+KEAF+VFDKD NGFISA ELRHVM NLGEKLTDEEVDEMIREAD+DGD QINY EFVK+MM K
Sbjct:    9 NELTEEQIAEFKEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMMQK 155          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALN_CHICK (Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.218e-66
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 2
Query:   83 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 475
            EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct:    1 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDSNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 131          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.464e-65
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 2
Query:  125 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124          

HSP 2 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 2
Query:   50 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 277
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:   48 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CML11_ARATH (Calmodulin-like protein 11 OS=Arabidopsis thaliana GN=CML11 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.149e-61
Identity = 110/144 (76.39%), Postives = 132/144 (91.67%), Query Frame = 2
Query:   59 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 490
            +LT +QI EFKEAF LFDKDGDGCIT  EL TV+RSL QNPTE ELQDMI E+D+DGNGTI+F EFLNLMA ++++TD++EELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEEVD+MI+EAD+DGDGQ+NY+EFV++MM
Sbjct:   27 ELTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQMIKEADLDGDGQVNYDEFVRMMM 170          
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM3_SOLTU (Putative calmodulin-3 (Fragment) OS=Solanum tuberosum GN=PCM3 PE=5 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.787e-61
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 2
Query:  125 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK+KDTD EEELKEAFRVFDKD+NGFISAAEL HVMTNLGEKLTDEEVDE+IREADVD DGQINY+EFVKVMMAK
Sbjct:    1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKIKDTDFEEELKEAFRVFDKDRNGFISAAELPHVMTNLGEKLTDEEVDEIIREADVDCDGQINYDEFVKVMMAK 124          
The following BLAST results are available for this feature:
BLAST of FC870866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_AJECG1.176e-6782.55Calmodulin OS=Ajellomyces capsulata (strain ATCC 2... [more]
CALMS_CHICK1.176e-6781.88Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALMB_ARBPU1.176e-6790.58Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CALL3_MOUSE1.176e-6781.21Calmodulin-like protein 3 OS=Mus musculus GN=Calml... [more]
CML1_ORYSJ2.620e-6784.56Calmodulin-like protein 1 OS=Oryza sativa subsp. j... [more]
CALMF_NAEGR5.838e-6784.35Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]
CALN_CHICK2.218e-6693.13Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV... [more]
CALM2_SOLTU5.464e-6599.19Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=... [more]
CML11_ARATH2.149e-6176.39Calmodulin-like protein 11 OS=Arabidopsis thaliana... [more]
CALM3_SOLTU4.787e-6194.35Putative calmodulin-3 (Fragment) OS=Solanum tubero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1AC07ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1AC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870866 ID=FC870866; Name=FC870866; organism=Citrus clementina; type=EST; length=783bp
GGGGGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAAAAGAAGAAAA
TGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAAAGAAGCCTTC
AGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGG
CACTGTTATGAGGTCACTGGGTCAAAACCCCACTGAGGCTGAGCTCCAGG
ACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCT
GAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGA
GGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCA
TCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGGGGAGAAGCTT
ACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGA
TGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAG
TGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAATTGGTTGATTA
ATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACT
CTGAGGTCAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGT
GACTGGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTT
CTGTGAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCTTATTT
CTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAA
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