FC870866

Overview
NameFC870866
Unique NameFC870866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.930e-74
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.930e-74
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.930e-74
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.930e-74
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.930e-74
Identity = 134/149 (89.93%), Postives = 148/149 (99.33%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MA+QLT++QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI+EVDAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA++RHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMMLAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 6.439e-74
Identity = 136/149 (91.28%), Postives = 145/149 (97.32%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 8.410e-74
Identity = 135/149 (90.60%), Postives = 145/149 (97.32%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 8.410e-74
Identity = 135/149 (90.60%), Postives = 145/149 (97.32%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.098e-73
Identity = 135/149 (90.60%), Postives = 145/149 (97.32%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of FC870866 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.098e-73
Identity = 135/149 (90.60%), Postives = 145/149 (97.32%), Query Frame = 2 
Query:   50 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 496
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of FC870866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_PROMN4.930e-7492.62Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI4.930e-7492.62Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI4.930e-7492.62Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU4.930e-7492.62Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM2_PETHY4.930e-7489.93Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALM_MACPY6.439e-7491.28Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE8.410e-7490.60Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU8.410e-7490.60Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_PYTSP1.098e-7390.60Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN1.098e-7390.60Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAA1AC07ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1AC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870866 ID=FC870866; Name=FC870866; organism=Citrus clementina; type=EST; length=783bp
GGGGGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAAAAGAAGAAAA
TGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAAAGAAGCCTTC
AGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGG
CACTGTTATGAGGTCACTGGGTCAAAACCCCACTGAGGCTGAGCTCCAGG
ACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCT
GAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGA
GGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCA
TCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGGGGAGAAGCTT
ACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGA
TGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAG
TGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAATTGGTTGATTA
ATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACT
CTGAGGTCAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGT
GACTGGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTT
CTGTGAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCTTATTT
CTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top