FC871933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTU (Elongation factor Tu OS=Mycobacterium tuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 81/233 (34.76%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETD 209
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 81/233 (34.76%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETD 209
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBT (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 81/233 (34.76%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETD 209
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBP (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 81/233 (34.76%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETD 209
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBO (Elongation factor Tu OS=Mycobacterium bovis GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 81/233 (34.76%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETD 209
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 71/226 (31.42%), Postives = 111/226 (49.12%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF------EGDNMIERSTNLDWY-KGPTLLDALD 764 ++K H+NI IGHVD GK+T T + L + ++F++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L + + + +PFV S +N I+R N +W K +L+DA+D Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAISATLAAANDTKAKKFDE---------------IDAAPEEKARGITINTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNVVVFLNKQDQVD---DEELLELVELEVRELLIQYDFPGDDIPFVAGSALLALEKVTENNSIQRGEN-EWVDKIHSLMDAVD 207
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 76/236 (32.20%), Postives = 111/236 (47.03%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSD 794 + K H+NI IGH+D GK+T T + L A + F +DK E+ RGITI IA +++T K + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + VP + +S EGD +W G LL+ + D+I EP+R D Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTAAITKVL-------------HDAHPDLNPFTPFDQIDKAPEEKARGITISIAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDID 210
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 73/233 (31.33%), Postives = 114/233 (48.93%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSD 794 + K H N+ IGHVD GK+T T I K + + + A + +DK ERERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++++ G QTREH LL+ +GV ++ NK+D + + + EV L + ++ + +P V ++ EG R N+ L+ A+D +I +P+RP D Sbjct: 8 RNKPHCNVGTIGHVDHGKTTLTA-------AITKVMADVYGGSAVDFAN--------IDKAPEERERGITISTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLSRQVGVPALVVYLNKVDQVD---DEELLELVELEVRELLSEYDFDGDNIPIVKGSALAALEG-----RDDNIGKESIVELMKAVDEHIPQPERPVD 210
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_BORRA (Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF 689 + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G+ P P V S F Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAF 175
BLAST of FC871933 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 108 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF 689 + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G+ P P V S F Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAF 175 The following BLAST results are available for this feature:
BLAST of FC871933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871933 ID=FC871933; Name=FC871933; organism=Citrus clementina; type=EST; length=796bpback to top |