FC871952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_YEAST (RING-box protein HRT1 OS=Saccharomyces cerevisiae GN=HRT1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.619e-35 Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 445 RFEIKKW+AVA W+WDI VDNCAICRNHIM+ CIECQ + T EC AWGVCNHAFH HCI++W+KTR CPLDN W+ + G Sbjct: 34 RFEIKKWTAVAFWSWDIAVDNCAICRNHIMEPCIECQPKAMTDTDNECVAAWGVCNHAFHLHCINKWIKTRDACPLDNQPWQLARCG 120
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX2_MOUSE (RING-box protein 2 OS=Mus musculus GN=Rnf7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.141e-22 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 188 FEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 445 F +KKW+AVA+W+WD+ D CAICR +MD C+ CQA E+C V WG CNH+FH C+S W+K CPL +W Q+ G Sbjct: 30 FSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIG 112
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX2_HUMAN (RING-box protein 2 OS=Homo sapiens GN=RNF7 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.141e-22 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 188 FEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 445 F +KKW+AVA+W+WD+ D CAICR +MD C+ CQA E+C V WG CNH+FH C+S W+K CPL +W Q+ G Sbjct: 30 FSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIG 112
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: APC11_DICDI (Anaphase-promoting complex subunit 11 OS=Dictyostelium discoideum GN=anapc11 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 203 WSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR--QVCPLDNSEWEFQ 436 W+ V+ W WD+ + C ICR C++C+ ++C WGVCNHAFH HCI +WL Q CP+ SEW F+ Sbjct: 9 WNTVSAWHWDVNEECCGICRMAFDGCCVDCKI-----PGDDCPPVWGVCNHAFHMHCILKWLNANELQQCPMCRSEWRFK 83
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: APC11_BOVIN (Anaphase-promoting complex subunit 11 OS=Bos taurus GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 439 R +IK W+ VA W W +NC ICR C +C+ ++C + WG C+H FH HCI +WL +QV CP+ EW+F++ Sbjct: 2 RVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLNAQQVQQHCPMCRQEWKFKE 84
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: APC11_MOUSE (Anaphase-promoting complex subunit 11 OS=Mus musculus GN=Anapc11 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 439 + +IK W+ VA W W +NC ICR C +C+ ++C + WG C+H FH HCI +WL +QV CP+ EW+F++ Sbjct: 2 KVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLNAQQVQQHCPMCRQEWKFKE 84
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: APC11_PONAB (Anaphase-promoting complex subunit 11 OS=Pongo abelii GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 439 + +IK W+ VA W W +NC ICR C +C+ ++C + WG C+H FH HCI +WL +QV CP+ EW+F++ Sbjct: 2 KVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLHAQQVQQHCPMCRQEWKFKE 84
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: APC11_HUMAN (Anaphase-promoting complex subunit 11 OS=Homo sapiens GN=ANAPC11 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 439 + +IK W+ VA W W +NC ICR C +C+ ++C + WG C+H FH HCI +WL +QV CP+ EW+F++ Sbjct: 2 KVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLHAQQVQQHCPMCRQEWKFKE 84 The following BLAST results are available for this feature:
BLAST of FC871952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871952 ID=FC871952; Name=FC871952; organism=Citrus clementina; type=EST; length=667bpback to top |