FC872079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2) HSP 1 Score: 308.916 bits (790), Expect = 2.249e-83 Identity = 154/280 (55.00%), Postives = 202/280 (72.14%), Query Frame = 1 Query: 1 GSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQGGIIN 840 G W GI+ ++WP KY++ +VTG+MAQYIP+LE+YS G LP+ TMYASSECYFG+NL+P+ +P++VS+T++PNM YFEFLP+ E G +LVDL V VG YELV+TT+AGLNRYR+GDVL+VTGF+N APQFRF+ R+NV+LSI++DKT+E +L ++V A LL P+ A +VEYTS A T +PGHYV+YWE+ + A +D L CC+ +EE L+ VYR+ R D S+GPLEIRVV PGTFE LMD S+G IN Sbjct: 298 GDWAGIITRVWPNTKYLDVIVTGAMAQYIPTLEFYSGG-LPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVD-ETGAASG---------DATQLVDLARVEVGREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVD-ADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASIN 565
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.458e-82 Identity = 154/282 (54.61%), Postives = 201/282 (71.28%), Query Frame = 1 Query: 4 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLG--GENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVD-SPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQGGIIN 840 +W+GI+ ++WP KY++ +VTG+MA+YIP LEYYS G LP+ +YASSE YFG+NL P+ P++VS+T+ PNM YFEFLP G+ G V LV+L V VG YELV+TT+AGL RYR+GD+L+VTGF+N APQF+FI R NV+LSI++DKT+E DL K+V A LL ++EYTSYADT T+PGHYV+YWE+ D S ALP D +V+ +CC+ +EE L+ VYR+ R DKS+GPLEIRVV+ GTFE LMD S+G IN Sbjct: 292 NWEGIITKIWPNTKYLDVIVTGAMAEYIPMLEYYSGG-LPMASMIYASSESYFGINLNPMCKPSEVSYTIFPNMAYFEFLPHNHDGDGG------------VEATSLVELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRENVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYADTKTIPGHYVIYWELLSRDQSNALPSD--EVMAKCCLEMEESLNAVYRQSRVSDKSIGPLEIRVVQNGTFEELMDFSISRGSSIN 558
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.450e-82 Identity = 148/282 (52.48%), Postives = 204/282 (72.34%), Query Frame = 1 Query: 7 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQK----VLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQGGIIN 840 W+GI+ ++WP KY++ +VTG+MAQYIP+L++YS G LP+ TMYASSECYFG+NL+P+ +P++VS+T++PNM YFE +P + L + P +LVDL VG YELV+TT+AGL RYR+GD+LQVTGF+N APQFRF+ R+NV+LSID+DKT+E +L +V A LL PY A +VEYTS AD +T+PGHYV+YWE+ + + A P ++ V E CC+ +EE L+ VYR+ R + +++GPLEIRVV GTFE +MD S+G IN Sbjct: 304 WEGIITRMWPNTKYLDVIVTGAMAQYIPTLKFYSGG-LPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPPL-------PRDAPPPRLVDLADAEVGREYELVITTYAGLCRYRVGDILQVTGFHNAAPQFRFVRRKNVLLSIDSDKTDEAELQAAVERASALLSPYGASIVEYTSQADATTIPGHYVVYWELMVREGGAWPPPAEEEGRGVFERCCLEMEEALNAVYRQGR-NGEAIGPLEIRVVRAGTFEEVMDYAISRGASIN 576
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH39_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica GN=GH3.9 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 9.779e-79 Identity = 147/281 (52.31%), Postives = 199/281 (70.82%), Query Frame = 1 Query: 1 GSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKN-LLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKV----LEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQG 828 G W GI+ ++WP KY++A+VTG+MAQYI +L+YYS G LP+V T YASSEC+FG+NL+P+ +P++VS+T++PN YFEFLP+G E V LVDL V VG YE+V+TT+AGL+RYR+GDVL+VTGF+N APQFRF+ R++V+LS++ DKT+E +LH++V A + LL P + EYTS A T +PGHYV+YWE+ + +SP D V L CC+ +EE L VYR+ R D S+GPLEIR+V PGTFE +MDL S+G Sbjct: 133 GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGG-LPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVG--------------EVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWEL-LTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRG 397
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.237e-73 Identity = 132/254 (51.97%), Postives = 185/254 (72.83%), Query Frame = 1 Query: 4 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPL 765 +W+GI+ ++WP KY++ +VTG+MAQYIP+LEYYS G LP+ TMYASSE YFG+NLKP+ P++VS+T++PNM YFEFLP + + E + LV+L +V VG YELV+TT+AGL RYR+GD+L+VTGF+N APQF+FI R+NV+LS+++DKT+E +L K+V A L +EYTSYA+T T+PGHYV+YWE+ D + L ++V+ +CC+ +EE L+ VYR+ R DKS+GPL Sbjct: 294 NWEGIITKIWPNTKYLDVIVTGAMAQYIPTLEYYSGG-LPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDG------DGAAEASLDETSLVELANVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSVESDKTDEAELQKAVENASRLFAEQGTRGIEYTSYAETKTIPGHYVIYWELLGRDQ-SNALMSEEVMAKCCLEMEESLNSVYRQSRVADKSIGPL 539
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 1.084e-69 Identity = 136/276 (49.28%), Postives = 183/276 (66.30%), Query Frame = 1 Query: 7 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVT-IAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLD-HQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQG 828 W GI+ +LWPRA+YI +VTGSM+QYIP LE Y G LPLV +YAS+EC G+NL+PL P+ VS+ LLPN+ YFEFL + ENG ++ + K+VDL V+VG YEL+VTTFAGL RYR+GD+ V+GFYN P F F R +V+LSID +K +EEDL ++ K L P +LV T+YAD ST+PGHY+L+WE+ + +D Q +E+CC+AVE+ D +YR+ R H S+ LEIR++ G F+ LMD S+G Sbjct: 302 WDGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGG-LPLVSPIYASTECAAGINLRPLDPPSHVSYALLPNIAYFEFLEVMDENGEKVQGTTRLDDNLGEVKVVDLVDVKVGRCYELIVTTFAGLYRYRVGDLFTVSGFYNATPLFHFSGRHDVILSIDYEKISEEDLLNAIAETDKFHLRPLGYMLVGSTAYADISTLPGHYILFWELTNTCDSNVAIDIDQTAMEKCCLAVEDHFDEMYRKIR-HRGSISALEIRILSHGAFDALMDFFVSRG 575
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH310_ORYSJ (Putative indole-3-acetic acid-amido synthetase GH3.10 OS=Oryza sativa subsp. japonica GN=GH3.10 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.917e-58 Identity = 119/221 (53.85%), Postives = 152/221 (68.78%), Query Frame = 1 Query: 1 GSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKN-LLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALP 660 G W GI+ +LWP+ K + VVTG MAQYIP+L+YYS G LP+V MYASSEC+FG+NL+PL P++VS+T++PN YFEFLP+G E V LV+L V G YE+VVTT+AGLNRYR+GDVL VTGF+N APQFRF+ R++V+LSI+ DKT+E +L ++V A + LL P A +VEYTS A T VPGH+ SPALP Sbjct: 277 GDWTGIVTRLWPKTKCLNVVVTGVMAQYIPTLQYYSGG-LPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLPVG--------------EAVDASNLVELARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQRAVERASSALLRPRGASIVEYTSRACTERVPGHF----------SPALP 472
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH35_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51 Identity = 111/284 (39.08%), Postives = 168/284 (59.15%), Query Frame = 1 Query: 4 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPL----GGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE-EQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQGGIIN 840 +W G++ LWP AKY+ ++TGSM Y+ L +Y AG LPL+ Y +SE + G N+ P P V++ +LP + YFEF+PL G E SI + E + V L V VG YE+V+T FAGL RYR+GDV+++ F+N P+ +FICRR++VLSI+ DK E+DL +V A LE ++++TS+ + S+ PG YV++WE+ S +VL C A++ +D Y R K++GPLE+R++ GTF+ ++D S GG ++ Sbjct: 279 NWYGVIPALWPNAKYVYGIMTGSMEPYLKKLRHY-AGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLEKPIGEETENSASIHYIESDPV------GLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARFHNSTPELQFICRRSLVLSINIDKNTEKDLQLAVEEASKFLEGEKLEVMDFTSFVERSSDPGRYVIFWELSGDAS-------DEVLSSCANALDLAFIDAGYTGSRK-IKTIGPLELRILRKGTFKEILDHFLSLGGAVS 547
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH312_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica GN=GH3.12 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 111/283 (39.22%), Postives = 167/283 (59.01%), Query Frame = 1 Query: 1 GSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEE-------EVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLL----EPYSAL-LVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQL--DYVYRRCRSHDKSVGPLEIRVVEPGTFETLM 807 G W G++ LWP A+Y++A +TGSM Y+ L +Y AG +PLV YASSE G+N + + P V FT+LP+ YFEF+PL + + N + + V L V VG +YE+V+TTF GL RYR+GDV++V GF++ P+ RF+CRR+++LSI+ DK +E DL +V A +L E + L + +YTS+ADTS+ PGHYV++WE+ + D VL+ CC ++ D Y + R ++G LE+RV+ G F+ ++ Sbjct: 291 GDWSGVIPALWPNARYVQATMTGSMEHYVKKLRHY-AGGVPLVSGNYASSEGVIGINAEQHAPPESVVFTVLPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTTFTGLYRYRLGDVVKVAGFHHATPKLRFVCRRSLILSINVDKNSEHDLQLAVDSAAKILAGDGENHKQLEIADYTSHADTSSDPGHYVVFWEL----NGGGEEDGGGVLQRCCDEMDRAFGADAGYAQSRK-TCAIGALELRVLRRGAFQEVL 567
BLAST of FC872079 vs. ExPASy Swiss-Prot
Match: GH36_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.6 OS=Oryza sativa subsp. japonica GN=GH3.6 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 8.667e-35 Identity = 91/282 (32.27%), Postives = 147/282 (52.13%), Query Frame = 1 Query: 7 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLFSIEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQI-VDSPALPLDHQK---VLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLCSQGGIIN 840 W+G+L QLWP A+YI V TG+M QY P++++++ LP++GT Y +SEC G+NL+ S P + ++ LLP YFEF+P F ++ + VD+ V G YELV TTF GL RY++GDV+++ GF++ +P+ +F+ R + E D+ ++ + +L+ ++E+ ++ I + V + + LDH++ L C +E L YR R+ V PLE+ VV PGTF+ L + G N Sbjct: 126 WRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIP--------FDMDAAGRGAAAAEP-VDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTRAPPPQE-HGEVLTERDVMAAMDTFQLMLKD-GGEVIEFAAFIIDGDGGQRRRRCATIAVEVSNGSKLLDHERSAAFLRRCTAPLEGCLGGAYRLSRA-TGDVAPLEVAVVRPGTFDRLAEAAIRGGAPAN 395 The following BLAST results are available for this feature:
BLAST of FC872079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872079 ID=FC872079; Name=FC872079; organism=Citrus clementina; type=EST; length=840bpback to top |