FC872093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.536e-32 Identity = 84/257 (32.68%), Postives = 124/257 (48.25%), Query Frame = 3 Query: 120 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRN-RIGFFTTFCGKFGIQP 863 CG G G +G G G + +++ F + C + FYT AF+ A K +P F + G++ KREIAAFFA ET +CYI ++++ ++ YC R PC +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ P Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINK-SNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDP 263
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.619e-32 Identity = 84/260 (32.31%), Postives = 121/260 (46.54%), Query Frame = 3 Query: 120 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQP 863 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F KREIAAFFA ET CYI +++ + DYC + PC +YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM + H+V+ L G+G T ING +EC AV R+ ++ +C +FG+ P Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVM---------------LQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDP 282
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32 Identity = 80/256 (31.25%), Postives = 117/256 (45.70%), Query Frame = 3 Query: 105 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQP 863 G G G G G + + E F + + + C + FYT +F+ AA+++ F N KREIAAFFA ET CYI +++ DYC + PC +YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM + H+V+ G+G T ING +EC AV R+ ++ +C +FG+ P Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSP 279
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30 Identity = 80/251 (31.87%), Postives = 119/251 (47.41%), Query Frame = 3 Query: 123 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRN-RIGFFTTFCGKFGIQP 863 G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E KREIAAFFA ET +CYI ++++ ++ YC R PC +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM V+ G+G T ING +EC G N A N R+G++ +C + + P Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINK-SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN---------------------NVHGVMPQGFGATIRAINGALEC-NGNNPAQMNARVGYYKQYCQQLRVDP 274
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.623e-29 Identity = 79/250 (31.60%), Postives = 114/250 (45.60%), Query Frame = 3 Query: 120 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC----YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGI 857 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E KREIAA FA ET +CYI ++ + DYC PC Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGV 262
BLAST of FC872093 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 648 MTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIEC 785 MT Q KPSCH+VI + W+P+A + AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of FC872093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872093 ID=FC872093; Name=FC872093; organism=Citrus clementina; type=EST; length=898bpback to top |