FC872099

Overview
NameFC872099
Unique NameFC872099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 84/136 (61.76%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 84/136 (61.76%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 84/136 (61.76%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 84/136 (61.76%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.660e-38
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDE GVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 212          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDET VE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37
Identity = 82/136 (60.29%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++E+VDETGVE KDIE VM+QA V R++AV+ALK    +IV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWVMSQANVSRAKAVRALKNNSNNIVNAIMELT 214          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 83/138 (60.14%), Postives = 103/138 (74.64%), Query Frame = 1
Query:  142 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMV-----QDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P SDTYIVFGEAKIEDLS Q Q  AAE+FK   P     A    ++  V     +D+E VD+TGV+ KDIELV+TQA   R++A+KALK  + DIV+AIMELT
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKA--PEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36
Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNV---ASKPE-----SSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP SDTY+VFGEAKIEDLS Q+   AAE+FKVP   +  V   A +P           +++E+VDE G+E +DIELVM QA V R++AV+AL+    DIV+AIMELT
Sbjct: 1420 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACP1_HUMAN (Putative nascent polypeptide-associated complex subunit alpha-like protein OS=Homo sapiens GN=NACAP1 PE=5 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A  KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTY+VFGEAKIEDLS + Q  AAE+FKV      N+    ++  + +  +DE+VDETGVE KDIELV++QA V  ++AV+ALK ++ DIV+AIMELT
Sbjct:   78 ARFKLGLQQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYMVFGEAKIEDLSQEAQLAAAEKFKVQGEAVSNIQENTQTPTVQEGSEDEEVDETGVEIKDIELVLSQANVWGAKAVRALKNSN-DIVNAIMELT 212          
The following BLAST results are available for this feature:
BLAST of FC872099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_MOUSE7.453e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_HUMAN7.453e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOVIN7.453e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACAM_MOUSE7.453e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_XENLA1.660e-3861.03Nascent polypeptide-associated complex subunit alp... [more]
NACA_PONAB4.831e-3861.03Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHILA1.406e-3760.29Nascent polypeptide-associated complex subunit alp... [more]
NACA_DROME6.976e-3760.14Nascent polypeptide-associated complex subunit alp... [more]
NACAD_HUMAN7.713e-3657.75NAC-alpha domain-containing protein 1 OS=Homo sapi... [more]
NACP1_HUMAN1.718e-3558.82Putative nascent polypeptide-associated complex su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CE10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872099 ID=FC872099; Name=FC872099; organism=Citrus clementina; type=EST; length=706bp
GGGGTAGTCGAGGACGACGTTGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAAAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCAAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTATGTTGCTCTGCTGAATGATCCCATAAGGAAATCTTT
TTTTTTTTTTTTCTCGCTGTTACCATTTACAATTGAAGTTGCAGATTTTT
GCTGGCTTTATAACTTTTCTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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