FC872099

Overview
NameFC872099
Unique NameFC872099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF-----------------------KVPPPNTGNVASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            ++ KLG+  +PG++RVT+++ KNILFVI+ P+V+KSPTS+TYIVFGEAKIEDL+SQ Q  AA Q                        K    +TG+   + E      D E+VD TG+E KDIELVMTQA V R++AVKALK  D DIV++IM L+
Sbjct:   61 SIAKLGLTRVPGITRVTLRRPKNILFVINNPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTGDEKKEEEE----DDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 213          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_ASPTN (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.174e-30
Identity = 73/147 (49.66%), Postives = 105/147 (71.43%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF---KVPPPNTGN-------VASKPES---SAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KLG+K +PG++RVT ++ KNILFVI++P+V++SP+S+T+I+FGEAKIEDL++Q Q  AA+Q    +    + G+        A +PE+    A   D E+VDE+G+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKLVPGITRVTFRRPKNILFVINQPEVYRSPSSNTWIIFGEAKIEDLNAQAQASAAQQLAAQEAAQEHAGHEHEDILGKAKEPEAEKKEAEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 72/147 (48.98%), Postives = 101/147 (68.71%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPN---------TGNVASKPESSAMVQ----DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL++  Q  AA+Q      N                PE+ A  +    D E+VDE+G+E KDIELVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNATAQATAAQQLAEAAANEHAGHDHEHDHGKGKAPEAEAKKEEEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_PHANO (Nascent polypeptide-associated complex subunit alpha OS=Phaeosphaeria nodorum GN=EGD2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30
Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA--------------------SKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KLG+K I G++RVT+++ KNILFVI++PDV+KSP+S+T+I+FGEAKIEDL+SQ Q  AA+Q       + + +                     + +     +DDE+VD++G+E KDIELVM QA V R +AVKALK  D DIV++IM L+
Sbjct:   57 AIAKLGLKHIDGITRVTLRRPKNILFVINQPDVYKSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAQAEAASHDHSGHDHDHDHKGKGKAVEDKKDDEEDEEEEEEDDEEVDDSGLEAKDIELVMQQASVSRKKAVKALKENDNDIVNSIMALS 210          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_NEUCR (Nascent polypeptide-associated complex subunit alpha OS=Neurospora crassa GN=egd-2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29
Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS--------QLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KL ++ +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++        QL +Q+AE       +    A K +      + E+VD  G+E KDIELVMTQA V R +A+KALK  D DIV++IM L+
Sbjct:   58 AIEKLHLQRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLASQSAEHDHAGHTHEHEEAGKAKEEEEEDEGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMV----------QDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KL +  + G++RVT+++ KNILFVI+ P+V+KSP S TYIVFGEAKIEDL++  Q  AA+Q      +  + A      A             DDE+VD  G+E KDIELVMTQAGV R++A+KALK  D DIV++IM L+
Sbjct:   57 AIEKLHLIRVDGITRVTLRRPKNILFVINNPEVYKSPNSGTYIVFGEAKIEDLNASAQAAAAQQLASSAGHDHDHAGHSHGEAKASEGDAKKEEEDDDEEVDADGIEDKDIELVMTQAGVSRTKAIKALKENDNDIVNSIMALS 200          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGN-----------------VASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KLG+K +PG++RVT+++ K ILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q         N                 V S  +      D+E  D +G+E KDIELVM QA V R++A+KALK  D DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGSNEHAGHDHASHDHGKGKAVESADKKDEEEDDEEVFDASGLEAKDIELVMAQASVSRNKAIKALKENDNDIVNSIMALS 207          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_CHAGB (Nascent polypeptide-associated complex subunit alpha OS=Chaetomium globosum GN=EGD2 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF---KVPPPNTGNVASKPESSAMVQ-----DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KL +  +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++  Q  AA+Q         + G+       +A  +     D E+VD  G+E KDIELVMTQA V R +A+KALK  D DIV++IM L+
Sbjct:   58 AIEKLHLTRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLANQTAEHDHAGHTHDHKHEAAKEEEEEEDDGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 73/151 (48.34%), Postives = 97/151 (64.24%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEK-----------------VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            A+ KL +  IPG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIED+++  Q  AA Q         +  +  E S  V+ DEK                 VD +G+E KDIELVMTQA V R++AVKALK  D DIV++IM L+
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNAAAQQAAAAQLASQNAEDHSGHNHGEPSKAVEADEKKEDKEDDEDEEEEEEEEVDASGLEDKDIELVMTQANVSRNKAVKALKENDNDIVNSIMALS 208          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_PICGU (Nascent polypeptide-associated complex subunit alpha OS=Pichia guilliermondii GN=EGD2 PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 61/148 (41.22%), Postives = 96/148 (64.86%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF----------------KVPPPNTGNVASKPESSAMVQDDE-KVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KL +KP+PG++RVT K+  N+++ I +PDVFKS  + TY+VFGEAK++D++ ++    A+Q                 K P   T ++ +       V++DE +VDETG++ KDIE+++ Q  V R++AVKAL+A  GD+V+AIMEL+
Sbjct:   32 KLHLKPVPGITRVTFKQKGNLIYAIEQPDVFKS-AAGTYVVFGEAKVDDMNKRIAEAQAQQEQQEALTKAAADAETADKSPESITNDLQNASLEDKTVEEDEGEVDETGLDSKDIEIIVEQTQVSRAKAVKALRAHKGDMVNAIMELS 178          
The following BLAST results are available for this feature:
BLAST of FC872099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_SCLS17.471e-3149.04Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPTN2.174e-3049.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC2.839e-3048.98Nascent polypeptide-associated complex subunit alp... [more]
NACA_PHANO4.842e-3046.75Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEUCR1.840e-2949.30Nascent polypeptide-associated complex subunit alp... [more]
NACA_MAGGR2.403e-2949.31Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN2.403e-2946.36Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHAGB4.099e-2949.30Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE2.657e-2848.34Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICGU2.328e-2441.22Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CE10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872099 ID=FC872099; Name=FC872099; organism=Citrus clementina; type=EST; length=706bp
GGGGTAGTCGAGGACGACGTTGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAAAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCAAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTATGTTGCTCTGCTGAATGATCCCATAAGGAAATCTTT
TTTTTTTTTTTTCTCGCTGTTACCATTTACAATTGAAGTTGCAGATTTTT
GCTGGCTTTATAACTTTTCTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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