FC872099

Overview
NameFC872099
Unique NameFC872099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_USTMA (Nascent polypeptide-associated complex subunit alpha OS=Ustilago maydis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPP-----------NTGNVASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIM 531
            A+  +G+K + G++RVT+++ +  L+VI++P+V+KS  SD YIVFGEAK ED+S   Q QAA+Q                 ++ + A K        DD  +DE GV+ KDI+LVM Q    R +AVKALK ++GD+++AIM
Sbjct:   46 ALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHSDVYIVFGEAKAEDMSQLAQAQAAQQMAQAEAQERLLAESLQNSSASGAEKKVEEEEEDDDSPIDEEGVDAKDIDLVMQQVSCSRRKAVKALKESNGDLINAIM 187          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 69/153 (45.10%), Postives = 92/153 (60.13%), Query Frame = 1
Query:  142 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-SAMVQ----------------DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS   + ++VFGEAK++D + +L   Q    +   V P     V+  P+S  A +Q                DD +VDETG+   DIELVM QAGVPR++A KALK  D DIV+AIM L+
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKSQGGN-FVVFGEAKVDDFTQRLAKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAKAAKALKEHDSDIVNAIMALS 175          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23
Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK--PESSAMVQDD----------------EKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P SDTY++FGEAK+ED+S     +AA++          V +    +SSA                      K DE+ V   DI+LV++Q G  R +AV+AL    GDIV  IM+L+
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLS 196          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF---------------KVPPPNTGNV------ASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TY+VFGEAK++D++ ++   Q Q A+Q                K P   T ++        +  + A   D+E+VDETG+ PKDI+L++ Q  V R  AVKALK  DGD+V+A+MEL+
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQAG-TYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRGSAVKALKKHDGDMVNALMELS 182          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22
Identity = 60/152 (39.47%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF--------------KVPPPNTGNVASKPESSAMVQDDEK----VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KL +K I G+SRVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   Q Q A+Q               K P   T ++          +D+E+    +DETG++PKDIE+V+ Q  V R++AVKAL+  DGD+V+AIM+L+
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAKAVKALRNHDGDMVNAIMDLS 178          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22
Identity = 61/143 (42.66%), Postives = 92/143 (64.34%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-------SAMVQDDE--KVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            K  MKP+PG++RVT +K  N +F I  PDV+K+   + Y+VFGE K++D + +L   Q QAA   K P     ++A+   +       +A  ++DE  +VDE+G++ +DIELVM QA V R++AVKAL+  + DIV+AIM L+
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKTQGGN-YVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNKAVKALREHNSDIVNAIMSLS 167          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21
Identity = 58/141 (41.13%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL------QTQAAEQFKVPPPNTGNVASKPESSAMVQD----DEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KLG+K + G++RV +++ KNIL +I++P V+KS +++ YIV G+  +ED+++Q       Q QA E  +       +  ++P  +A +++    ++ VDETGV+ KDIELVM QA V R++AV ALK  + D+V+AIM LT
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTALKENNSDVVNAIMSLT 172          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21
Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPP--NTGNVASKPESSAMVQ------------------DDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KL +K I G++RVT K+  N+++ I +PDVF+S ++ TY+VFGEAK++D++ ++   Q Q A+Q  +      TG    + +S   +                   DD +VDE+G++ KDI++++ Q  V R++AVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRVHDGDMVNAIMELS 180          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_PICST (Nascent polypeptide-associated complex subunit alpha OS=Pichia stipitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20
Identity = 58/150 (38.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query:  148 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL-QTQAA----------------EQFKVPPPNTGNV--ASKPESSAMVQDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            KL +K I G++RVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   QAA                E+ K P   T ++  AS  E     +++ +VDE+G++ KDI++++ Q  V R++AVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDAPDVYRS-AAGTYVVFGEAKVDDMNQRIADAQAAQAAETDAHAGHTHSHGEEDKSPEAITADLEKASLTEKIEEEEEEGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRKHDGDMVNAIMELS 176          
BLAST of FC872099 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  139 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQ-----TQAAEQFKVPPPNTGNVASKPESSAMV-QDDEKVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 540
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TY+VFG+   +D++S+LQ         +  K   P    V    ES  +V Q  +  D  GV PKD+E+VM +    R + V+ L A   D+VSA++ELT
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETLIATKNDLVSAVLELT 158          
The following BLAST results are available for this feature:
BLAST of FC872099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_USTMA6.773e-2441.55Nascent polypeptide-associated complex subunit alp... [more]
NACA_KLULA6.773e-2445.10Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI3.361e-2341.61Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL1.277e-2240.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL3.716e-2239.47Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO8.279e-2242.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO1.844e-2141.13Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA3.146e-2137.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICST1.195e-2038.67Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI3.478e-2037.14Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CE10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872099 ID=FC872099; Name=FC872099; organism=Citrus clementina; type=EST; length=706bp
GGGGTAGTCGAGGACGACGTTGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAAAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCAAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTATGTTGCTCTGCTGAATGATCCCATAAGGAAATCTTT
TTTTTTTTTTTTCTCGCTGTTACCATTTACAATTGAAGTTGCAGATTTTT
GCTGGCTTTATAACTTTTCTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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