FC872116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 322.398 bits (825), Expect = 1.974e-87 Identity = 161/255 (63.14%), Postives = 186/255 (72.94%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G T TGS NVVDGSTTF+SAT+A VG+GF+ +DI QNTAGP+K QAVALRVGAD+S C + AYQDTLY HS RQF+ + + GTVDFIFGNAA V Q C + ARKP Q+NMVTAQGRTDPNQ TG IQ I A+SDL+ V FPTYLGRPWKEYSRTV+M+S + LI+PAGW EWDG+FAL TL+YGE N+G GAGTS RVKW G+ VIT +A FT I G SWL STG + GL Sbjct: 290 GMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 321.627 bits (823), Expect = 3.368e-87 Identity = 160/251 (63.75%), Postives = 187/251 (74.50%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 758 G+ TI TGS NV+DGSTTF+SATVA G+GF+A+DI FQNTAGP+KHQAVALRV AD + C + AYQDTLY H+ RQF+ + I GTVDFIFGN+A V QNCDI AR P +GQKNM+TAQGR D NQNT I IQK +I A+SDL V+GS T+LGRPWK YSRTVIMQS I + I PAGW WDG FAL+TL+YGE+ N+G GA TS RV WKGF+VI + EA+ FT I G WL TG F Sbjct: 303 GKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 5.744e-87 Identity = 160/255 (62.75%), Postives = 185/255 (72.55%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G TI TG+ NVVDGSTTF SAT+A VG+GF+ +DI QNTAGP+KHQAVALRVGAD S C + AYQDTLY HS RQF+ + + GT+DFIFGNAA V Q C + ARKP Q+NMVTAQGRTDPNQ TG IQ I A+SDL+ V FPTYLGRPWK+YSRTV+M+S + LI+PAGW EWDG+FAL TL+YGE N+G GAGTS RVKW G+ IT EA FT I G SWL STG + GL Sbjct: 294 GMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 6.351e-86 Identity = 154/255 (60.39%), Postives = 183/255 (71.76%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G+ +T+ +G +++ D TTF +A+ A G GF+ARDITF+N AGP+KHQAVALR+GAD + Y C+++ YQDTLYVHSNRQFF C I GTVDFIFGNAA VLQNC I+ARKP QKN +TAQ R DPNQNTGI I SR+ A SDL+ GS TYLGRPWK +SRTV M S I +H GW EW+ FAL+TL+YGE+ NSG G+G RV W G+RVI S EA FT FI GSSWL STG F GL Sbjct: 342 GKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 8.294e-86 Identity = 153/255 (60.00%), Postives = 184/255 (72.16%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G RTI T +RNV DGSTT+ SAT V G+GF ARDITF+NTAGP KHQAVALRV +DLS FY C YQDTL+ HS RQF+ + I GT+DFIFG+AAAV QNCDI R+P Q NM+TAQGR DP+ N+GI IQ SRI A + + V+G F +YLGRPWK+YSRTV +++ I +LI P GW EW G++AL+TL+YGE N+GAGAGT RV W GF V+ EA FT FI G SW+ TG PFS G+ Sbjct: 265 GMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 1.083e-85 Identity = 159/255 (62.35%), Postives = 183/255 (71.76%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G TI TGS NVVDGSTTF SAT+A VG+GF+ +DI QNTAGP+KHQAVALRVGAD S C + AYQDTLY HS RQF+ + + GT+DFIFGNAA V Q C + ARKP Q+NMVTAQGRTDPNQ TG IQ I A+ DLK V FPTYLGRPWK+YSRTV+M+S + LI P+GW EW G+FAL TL+YGE N+G GAGTS RVKW G+ VIT EA +FT I G SWL ST + GL Sbjct: 294 GMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.848e-85 Identity = 150/255 (58.82%), Postives = 185/255 (72.55%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G+ +T+ TG +++ D TTF +AT A G GF+ RD+TF+N AGP+KHQAVALRVG D + Y C+++ YQD LYVHSNRQFF C I GTVDFIFGNAA +LQ+C+I+ARKP + QK +TAQ R DPNQNTGI I ++ AT DL+ +GS+PTYLGRPWK YSR V M S + D I P GW EW+G FAL++L+YGE+ N G G+G RVKW G+ VITS EA FT FI+GSSWL STG F GL Sbjct: 331 GKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.950e-83 Identity = 150/255 (58.82%), Postives = 179/255 (70.20%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G T+ TG+R+ +DG TTF+SAT AV G GF+ARDITFQNTAGP KHQAVA+R DL FY C M YQDTLY HS RQFF C+I GTVDFIFG+A AV Q+C I A++ QKN +TAQGR DPN+ TG IQ S I A +DL L + TYLGRPWK YSRTV MQ+ ++D I+P GW EW+GNFAL+TL+YGE+ NSG GA RVKW G+ V+ ++ EA FT I G+ WL STG F GL Sbjct: 271 GIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.583e-83 Identity = 150/253 (59.29%), Postives = 185/253 (73.12%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQ-GSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 761 G TI +G+R+ VDG TTF+SAT AV G GF+ARDITF+NTAGP KHQAVALR +DLS FY C++ YQDTLY H+ RQF+ +C I+GTVDFIFG+A V QNC I A+K QKN +TAQGR DPN+ TGI IQ I A SDL+ S PTYLGRPWK YSRTVIMQS ++++I P GW EW+G+FALN+LFYGE+ N G GAG RVKW G++V +T+A+ +T FI G+ WL STG ++ Sbjct: 265 GMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.464e-82 Identity = 147/255 (57.65%), Postives = 186/255 (72.94%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G TI TG+RNV DG+TTF+SAT AV G GF+A+ ITF+NTAGP KHQAVALR +D S FY C YQDTLY+HS+RQF NC I GTVDFIFG+A A+LQNC+I+ARKP SGQKN +TAQ R +P++ TG VIQ S + S+ TYLGRPW+ +SRTV M+ ++ L+ PAGW W G+FAL+TL+YGE+ N+GAGA SGRVKW G+ VI + TEA+ FT +F+ G+ W+ +TG P + GL Sbjct: 309 GIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554 The following BLAST results are available for this feature:
BLAST of FC872116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872116 ID=FC872116; Name=FC872116; organism=Citrus clementina; type=EST; length=839bpback to top |