FC872116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.497e-82 Identity = 156/255 (61.18%), Postives = 178/255 (69.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G TI TGS NVVDGST F S T+A VG+GF+ +DI QNTAGP K QAVALRVGAD+S C + AYQDTLY HS RQF+ + + GTVDFIFGNAA V Q C I ARKPN QKNMVTAQGRTDPNQ TG IQ I A+ DL+ V + TYLGRPWK++SRTV+MQS + I P+GW EW G+FAL TL+YGE N+G GAGTS RVKW G+ VIT EA FT I G SWL ST + GL Sbjct: 289 GMNATIITGSLNVVDGST-FPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 3.053e-80 Identity = 145/255 (56.86%), Postives = 180/255 (70.59%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G RT+ TG+RNVVDG TTF SAT AV F+A ++TF+NTAGP KHQAVA+R ADLS FY+C AYQDTLY HS RQF+ C I GTVDFIFGNAA V Q+C+++ R+P Q N +TAQGRTDPNQNTGI I I DL + TYLGRPWKEYSRTV MQS I +++ P GW EW+G+FAL+TL+Y E+ N+G+G+ T+ RV W G+ VI S T+A FT +F+ G W+ +G P+ GL Sbjct: 318 GINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 3.987e-80 Identity = 144/255 (56.47%), Postives = 179/255 (70.20%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +T+ TG+R+VVDG TTF SAT + G F+ +IT +NTAGP+K QAVALR G DLS FY+C AYQDTLY HS RQF+ C + GTVDFIFGNAA VLQNC+++ R+P GQ N VTAQGRTDPNQNTG I I DL + TYLGRPWKEYSRTV+MQ+ I + P+GW+ W G+FAL+TL+Y E+ N+G G+ T+ RV W G+ VI +AT+A FT +F+ G W+G TG PF GL Sbjct: 305 GINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 9.821e-79 Identity = 144/255 (56.47%), Postives = 175/255 (68.63%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +T+ TG+R+VVDG TTF SAT AV F+A +ITF+NTAGP KHQAVALR GAD S FY+C AYQDTLY HS RQF+ C + GTVDFIFGNAA V QNC+++ RKP Q N +TAQGR+DPNQNTG IQ I DL + TYLGRPWKEYSRTV MQS I + P GW EW+G+FAL+TL+Y E+ N+G G+ T+ RV W G+ VI S T+A FT + W+ TG P++ GL Sbjct: 324 GINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.283e-78 Identity = 146/255 (57.25%), Postives = 178/255 (69.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI TG+ NVVDG TT+ ++ AVVGE F+A D+TF+NTAGP KHQAVALR A+ S+FY C YQDTLYVHS RQF+ C I GTVDFIFGNAAA+ QNC+I+ARKP + QKN +TA GR DPNQNTGI I I A DL S T+LGRPWK YSRTV MQS I+D++ P GW EW+G L+T++YGE+ N G GA T+ RV+W G+ ++ A EA FT +F G +WL T PF GL Sbjct: 362 GINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.283e-78 Identity = 148/255 (58.04%), Postives = 175/255 (68.63%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G+ +T+ GSR+ G TT+K+ATVA +GEGF+ARD+TF N AGP QAVALRVGAD S + C + YQD+LY HS RQF+ I GTVDFIFGN+A V Q+C+I ARKP GQ+N VTAQGR++P QNTGI IQ RI A S TYLGRPWKEYSRTV+MQS I IHP+GW W G F L +LFYGE+ NSG G+ SGRVKW G + TEA+ FT SFI G+ WL STG F GL Sbjct: 271 GKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 2.857e-78 Identity = 142/251 (56.57%), Postives = 176/251 (70.12%), Query Frame = 3 Query: 18 TIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 T+ +G+R+ +DG TTF+SAT AV G GFLARDITFQNTAGP KHQAVALR +DLS F+ C M YQDTLY H+ RQF+ C I GTVDFIFG+ V QNC I A++ QKN +TAQGR D NQ +G IQ S I A +DL + TYLGRPWK YSRTV ++++++D++ P GW EW+ +FAL+TLFYGE N G G+G S RVKW G+ V ++ +A FT FI G+ WL STG FS GL Sbjct: 273 TVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.857e-78 Identity = 149/255 (58.43%), Postives = 178/255 (69.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI TG RN + G TTF++ATVAV G GF+A+DITF+NTAGP QAVALRV +D SAFY C + YQDTLY HS RQF+ +C I GT+DFIFGN AAVLQNC I+ R P QK +TAQGR PNQNTG VIQ S + AT PTYLGRPWK YSRTV M + ++ L+ P GW EW GNFAL+TL+YGE+ N G G +SGRVKW G+ ++ T A +FT GSFI G WL +TG F+ GL Sbjct: 297 GIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.418e-77 Identity = 146/257 (56.81%), Postives = 176/257 (68.48%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW--DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI T R+V G TT+ SAT G+ F+A+D+TF NTAGP + QAVA+R +DLS FY + +QDTLY+HS RQFF C I+GT+DFIFGNAA V QNC I R+P GQ N++TAQGR DP QNTGI I SRI A SDLK V ++ TYLGRPW+ YSR IM++ I + I P GW W NFALNT+FYGE++N G G+ T RV+WKGF ITS A FT GS IAG SWL +TG PF GL Sbjct: 338 GERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.852e-77 Identity = 144/257 (56.03%), Postives = 181/257 (70.43%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGN-FALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G TI TG R+V G TT+ SAT + G F+A+ ITF+NTAGP+K QAVALR +DLS FY C + YQDTL VHS RQF+ C I GTVDFIFGNAAAV QNC I R+P GQ N++TAQGR DP QNTGI I SRI DLK V G+ TY+GRPW ++SRTV++Q+ + +++ P GW W +G+ F L+TLFY E++N+G + T RV WKGF V+ A++A AFT G FIAG++WL TG PF+ GL Sbjct: 280 GMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536 The following BLAST results are available for this feature:
BLAST of FC872116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872116 ID=FC872116; Name=FC872116; organism=Citrus clementina; type=EST; length=839bpback to top |