FC872116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.537e-71 Identity = 134/255 (52.55%), Postives = 171/255 (67.06%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G T TG+R+V DG TTF+SAT+AV GEGFLARDI NTAGP KHQAVALRV AD A Y C + YQDTLY HS RQF+ C I GT+D+IFGNAA V Q C+I ++ P GQ ++TAQ R +++TGI +Q I A+ DL +YLGRPW+E+SRTV+M+S I + I +GW +W+G AL+TL+YGE+ N+G G+ T RV W GF ++ +A FT FI G WLGST FP+ G+ Sbjct: 294 GSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 9.844e-71 Identity = 127/255 (49.80%), Postives = 168/255 (65.88%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI +G++N DG TT+++ATVA+VG F+A++I F+NTAG KHQAVA+RV +D S F+NC YQDTLY HS+RQFF +C I+GT+DF+FG+AAAV QNC + RKP Q +TA GR DP ++TG V Q I D V+ + YLGRPWKEYSRT+IM + I D + P GW W G+F L TLFY E QN+G G+ + RV W G + + S + FTP +I G W+ G P++ GL Sbjct: 312 GPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.193e-70 Identity = 130/252 (51.59%), Postives = 173/252 (68.65%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 758 G T+T TGS N G T+ +ATVA+ G+ F A++I F+NTAGP HQAVALRV ADL+ FYNC + YQDTLYVHS+RQFF +C ++GTVDFIFG+ VLQNC+I RKP Q M+TAQGR+D ++TG+V+Q I V+ YLGRPWKE+SRT+IM ++I D+I PAGW W+G+FALNTL+Y E++N+G G+ + RVKW G + + S +A FTP F+ G+ W+ P+ Sbjct: 316 GPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.421e-69 Identity = 126/253 (49.80%), Postives = 177/253 (69.96%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVV-DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 761 G T+T+ TG + D T+++A+VAV G+ F+A+DI F+NTAG ++HQAVALRV AD + F+NC M YQDTLYVH++RQF+ NC ++GT+DF+FG+A AV QNC+ R+P Q+ +VTAQGR D + TGIVI SRI + V+ +LGRPWKE+SRT+IM + I D+I P GW +W+ FALNTLFY E++N G G+G RV+W+G + I S A+ F PG+F+ G++W+ T P++ Sbjct: 448 GPTKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPYN 699
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.167e-69 Identity = 131/256 (51.17%), Postives = 171/256 (66.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI TG+++ TF +AT GEGF+A+ + F+NTAGP HQAVA+RV +D S F NC YQDTLY +++RQ++ +C+I GTVDFIFG+AAA+ QNCDI RK GQKN VTAQGR D Q TG VI + DLK V+ F +YLGRPWK +SRTV+M+S+I D+I P GW W + +FA++TL Y E++N G T+ RVKW GFRV+ + EA FT G F+ G W+ + G P LGL Sbjct: 353 GSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQG-EWIQAIGSPVKLGL 606
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.501e-68 Identity = 127/256 (49.61%), Postives = 173/256 (67.58%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +TI TG+++ TF +AT GEGF+A+ + F+NTAG HQAVA+RV +D S F NC YQDTLY +++RQ++ +C+I GT+DFIFG+AAA+ QNC+I RK GQKN VTAQGR D Q TG V+ +I A DLK V+ + +YLGRPWK YSRT+IM+S I ++I P GW W + +FA++TL+Y E+ N G+ T+ RVKW GF+VI + EA +T G F+ G W+ ++G P LGL Sbjct: 358 GSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQG-DWISASGSPVKLGL 611
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.330e-67 Identity = 131/257 (50.97%), Postives = 163/257 (63.42%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWD-GNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG-SSWLGSTGFPFSLGL 770 G T+T TG+++V DG +TF + TV V G F+A++I F+NTAGP K QAVALRV AD + YNC + YQDTLYVH+ RQF+ +C I GTVDFIFGN AVLQNC + RKP Q MVTAQGRT+P Q IV+Q I +D + TYLGRPWKEYSRT+IMQS I I P GW W+ NF +T +Y E+QN G GA R+ WKGF+ + AQ FT G +I +WL P+ G+ Sbjct: 115 GPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.623e-65 Identity = 118/249 (47.39%), Postives = 169/249 (67.87%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTG 749 G+ +TI +GS+N VDG+ T+++AT A+ G+GF+ +DI NTAG +KHQAVA R G+D S +Y C +QDTLY HSNRQF+ +C + GT+DFIFG+AA V Q C I R+P S Q N +TAQG+ DPNQ++G+ IQ+ I A ++ PTYLGRPWKE+S TVIM++ I ++ P+GW W G ++ YGE++N+G G+ + RVKW G++ + S EA FT + + G+ W+ +TG Sbjct: 337 GKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 8.071e-65 Identity = 120/253 (47.43%), Postives = 169/253 (66.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 761 G +T+ TGS N G TF +AT+ + G+ F A++I +NTAGP QAVALRV AD + F++C + +QDTLYVHS+RQF+ +C ++GTVDFIFG+A +LQNC I RKPN GQ MVTAQGR++ ++TG+V+ I ++ YLGRPWKE+SRT+IM+++I D+I PAGW W G+FAL TL+Y EH N+G G+ + RVKW G + +T +A +T F+ G +W+ T P++ Sbjct: 314 GPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.232e-64 Identity = 125/255 (49.02%), Postives = 158/255 (61.96%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G+ TI T + + + TF +ATVA G GF+ D+ F+NTAGP+K AVALRV D+S Y C + YQD LY HS+RQF+ C I GTVDFI GNA AV Q C I AR+P GQ N++TAQ R + +G IQK I A+SDL + TYLGRPW+ +S +MQS I DL+ PAGW W+G L+TL Y E+QN G GA TS RVKW GF+V+ +A FT + G +WL T P+ GL Sbjct: 272 GQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524 The following BLAST results are available for this feature:
BLAST of FC872116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872116 ID=FC872116; Name=FC872116; organism=Citrus clementina; type=EST; length=839bpback to top |