FC872116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52 Identity = 114/258 (44.19%), Postives = 152/258 (58.91%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDP-NQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G +T+ + +R+V G+TT S TV V EGF+A+ I F+NTAGP HQAVA+RV D + +NC YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN I RK N GQ N VTA G GIV+Q RI L + +YLGRPWK++S TVI+ S I D+I P GW WDG + Y E+ N G GA T+ RV W ++ SA E FT +++ +W+ P +LGL Sbjct: 340 GARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.337e-51 Identity = 99/185 (53.51%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGW 560 GR T+ +G N VDG TF SAT+AV GF+A+D+ +NTAGP K QAVALR+ D++ Y C + AYQDTLY +S RQF+ +C I GTVDFIFG AAAV Q C I ARKP GQ N++TAQ R + +G QK I A+SDL ++G+ T+LGRPW+ +SR V M+S I D+I AGW Sbjct: 102 GRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.292e-50 Identity = 111/258 (43.02%), Postives = 151/258 (58.53%), Query Frame = 3 Query: 6 GRTRTIFTGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 770 G T+TI T R+V G+TT S TV V EGF+A+ I FQNTAGP +QAVA RV D + +NC YQDTLYV++ RQF+ N +++GTVDFI G +A V+QN I RK + GQ N VTA G+ GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I DLI P GW+EW G T Y E N G GA + RV W ++ SA E + FT +++ ++W+ LGL Sbjct: 316 GATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.415e-39 Identity = 95/231 (41.13%), Postives = 131/231 (56.71%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T+ SA+ AV F+A++ITF+NT G QAVALRV AD +AF+ C ML QDTLY H R ++ +C I G+VDFIFGNA ++ + C +HA G VTAQGR+ ++TG K ++ T L YLGR W +SR V + + ++I P GW+ W T+FYG+++ +GAGA GRV W R +T EA+ F +FI GS W+ Sbjct: 166 TYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLG---AVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.874e-37 Identity = 85/230 (36.96%), Postives = 123/230 (53.48%), Query Frame = 3 Query: 48 DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 DG +S T+ + F+ R +T QN G + +AVALRV AD +AFY C + +YQDTL + +F NC I G DFI G+A+++ + C +H+ PN+G +TAQ RT + +G ++ GS T+LGRPW YSR V S ++++ P GW++W + NT++YGE++ G GA RV+W S EA F FI G WL Sbjct: 119 DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGS---ITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS---KQLSDEEATVFLSKDFIGGKDWL 332
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.907e-35 Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 45 VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKW 656 V G+ TF +V V GE F+A +ITF+N+A QAVA+RV AD AFYNC L +QDTLY+H +Q+ +C I G+VDFIFGN+ A+L++C IH + + +TAQ R ++TG V + I S YLGRPW + R V+ + + I GWH W + + E++ G G+ +S RV W Sbjct: 86 VIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW 278
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.257e-33 Identity = 89/250 (35.60%), Postives = 127/250 (50.80%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA-RKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 G +RT + + TF S +VAV GE F A +I+F+NTA G QAVAL+V D +AFY C QDTL R FF C I G++DFIFGN ++ ++C +H+ K N+ +TA G+ TG V +I GS +LGR W+ Y+R + ++ ++ ++ GW++ T++YGEH+ G GA S RV + + S EA FT SFI G WL Sbjct: 98 GYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENT--IGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.800e-33 Identity = 88/236 (37.29%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI--HARKPNSGQK---NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 TF ATV V G F+A++I+F N A G QAVA+R+ D SAF C QDTL+ R +F +C I G++DFIFGNA ++ Q+C I A + + G K VTA GR+ ++N+G IG T + +LGR W+ YSR V + +++TD+I P GW+ ++ T+FYGE+ SG GA S R + + T+ SFI G WL Sbjct: 165 TFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAP---YVQKLNETQVALLINTSFIDGDQWL 388
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.657e-33 Identity = 84/230 (36.52%), Postives = 114/230 (49.57%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNT----AGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T+++A+V++ + F A ITF+NT AG QAVALR+ D + FY +L QDTL+ + +F C I G VDFIFGNA ++ Q+CDIH+ G + A R ++TG I T + YLGR W YSRTV I D+I P GW +W + +GE+ G GA GRV W + +T E + F FI G WL Sbjct: 164 TYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYG---AIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.784e-30 Identity = 83/236 (35.17%), Postives = 115/236 (48.73%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 746 T S + V F A +I+F+N A G + QAVALR+ D +AFY C QDTL R FF C I G++DFIFGN ++ Q+C I+ A+ SG +TAQGR ++ +G +I GS LGR W Y+ V + ++ +I P GW+ W + T+ +GEH+ G GA RV F + +EA +F SFI G WL T Sbjct: 165 TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVL---FGKQLTDSEASSFIDVSFIDGDEWLRHT 388 The following BLAST results are available for this feature:
BLAST of FC872116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872116 ID=FC872116; Name=FC872116; organism=Citrus clementina; type=EST; length=839bpback to top |