FC872116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.184e-29 Identity = 83/241 (34.44%), Postives = 114/241 (47.30%), Query Frame = 3 Query: 48 DGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 D ++ +S T A + + + + ITF N+ PS + AVA +G D SAFY+ QDTL+ R +F C I G VDFI G+ ++ Q+C I + G +TAQGRT+ N G V LV G YLGR W+ YSR + S++TD++ P GW EW+ L Y EH G+G+ TS R KW SA+ Q SFI W+ Sbjct: 95 DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWV---KKLSASAVQHLADLSFINRGGWV 323
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.137e-29 Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 3 Query: 48 DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIH-ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLF--YGEHQNSGAGA 632 D + TF++ V G ++ NT G + HQA+AL AD +Y C+ YQDTL + Q ++N I G VDFIFG +A A QN DI P S +TA GR+ + VI KS + A + +G++ YLGRPW EY+R V Q+S+T++I+ GW EW + NT + +GE+ N+GAG+ Sbjct: 110 DLTATFRNKAV-----GSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSAS---ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTS-TPNTEYVTFGEYANTGAGS 297
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.217e-28 Identity = 82/247 (33.20%), Postives = 115/247 (46.56%), Query Frame = 3 Query: 48 DGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP 755 D + +S T + + + + + ITF N+ PSK + AVA +G D SAFY+ QDTL+ R +F C I G VDFIFG ++ Q+C I + G +TAQGRT+P G + LV G+ +LGRPW+ YSR + S++TD++ P GW W+ N L + EH G+GA RVKW S + Q SFI W+ P Sbjct: 100 DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWV---KKLSESAIQNLADLSFINRGGWVEDLPIP 334
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 6.042e-28 Identity = 81/257 (31.52%), Postives = 118/257 (45.91%), Query Frame = 3 Query: 3 GGRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARD-------ITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK---NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 743 G R TI D S+TF S +V + +T N AVA+ V D SAFYNCD L QDT++ + R F NC I G +DFIFG+ +V ++C I+A K +TAQGR+ + +G V + V GS YLGR + +SR + +Q+ ++ ++HP GW+ W + Y E + GAG+ S RV W + S Q F+ +FI W+ + Sbjct: 44 GQRVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGS---------VSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27 Identity = 76/232 (32.76%), Postives = 109/232 (46.98%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWD-GNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T+++A+V V F AR+I+F NTA G QAVA R+ D + F C QDTL + R +F C I G++DFIFGN ++ ++C++H+ G + A GRT P + TG R V G+ P Y+GR +YSR V + L+ GW +WD + T F+G + G GA + V W A F SF+ G W+ Sbjct: 141 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGS---IAAHGRTCPEEKTGFAFVGCR---------VTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.943e-26 Identity = 77/230 (33.48%), Postives = 113/230 (49.13%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTAGP----SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T +SAT+ V E F A +T +NTA S+ QA+A+R+ AD +AFY+C +QDTL FF +C I GT DFIFG A++ N +HA G + ++TAQGR + G ++ T YLGR W + + V + +T +++P+GW E T+FYGE++ G G+ RV + E F +I GS+WL Sbjct: 140 TVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA--VGDGLR-VITAQGRQSATEQNGYTFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVP---YTQDIDKNEVTPFLTLGYIKGSTWL 355
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.665e-25 Identity = 76/250 (30.40%), Postives = 121/250 (48.40%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-----PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 G+ +T+ S++ VD SAT V F+A I+ +N A S++Q+VA V AD AFY+C + +TL+ + R ++ C I G++DFIFG A ++ NC+I + +TA R + TG V + + V G YLGR YSR + ++ ++ + P GW W + + L++GE++ G GA R W + +T E ++F FI G+SWL Sbjct: 102 GKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.787e-25 Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 3 Query: 66 KSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARK-PNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFA-LNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSW 734 ++AT+ EG ++ NT G + HQA+A+ A +Y C YQDTL + Q + I G VDFIFG +A A CDI + P+S +TA GR+ + ++ VI KS + A + G++ YLGRPW +Y+R ++S+TD+I+ GW EW + + + E+ N+G GA +G R S+ + T S++ GS W Sbjct: 110 ETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSAS---ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA--------EGPRANFSSELTEPITI-SWLLGSDW 321
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.165e-25 Identity = 83/264 (31.44%), Postives = 117/264 (44.32%), Query Frame = 3 Query: 3 GGRTRTIFT-GSRNVVDGSTTFKSATVAVVGEGFLARDITFQN------TAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARK---PNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQA--FTPGSFIAGSSWLGSTGFPF 758 GG +TI G + + S TF S ++ G ITF+N ++ P+K A+ +G D A + +QDTLY R ++ C+I+G +DFIFG A ++ + C + R P + +TAQGR P G V + V GS LGR WK YSR + +S +D I P GW W + + E +G GA TS RV W +T A+E FT +FI WL F Sbjct: 96 GGIEKTIIAYGDHQLTNTSATFTSYPSNIIITG-----ITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCT---------VMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339
BLAST of FC872116 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.852e-23 Identity = 71/230 (30.87%), Postives = 105/230 (45.65%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTAGPSKH----QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T +SAT+ V FLA ++ NT+ K QA+A+R+ D +AFYNC +QDTL FF NC I GT DFIFG A++ +HA G + ++ A R + G ++ YLGR W + + V + ++ +++P+GW E T+FYGE+ +G G+ + RV EA F +I GS WL Sbjct: 140 TVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA--VGDGLR-VIAAHNRQSTTEQNGYSFVHCKVTGVGT--------GIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRV---AHTQDIDNKEASQFLTLGYIKGSKWL 355 The following BLAST results are available for this feature:
BLAST of FC872116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872116 ID=FC872116; Name=FC872116; organism=Citrus clementina; type=EST; length=839bpback to top |