FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.115e-48
Identity = 100/203 (49.26%), Postives = 127/203 (62.56%), Query Frame = 2
Query:  164 GEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIK 772
            GEVLVR+   GVCHTDLHA  GDWP KP+LPL+ GHEG G I  +G G +T+LKVG  VGI WL  +C  C+ C  G E  C + Q +GYSVDG + +Y  + A +V  IPD L  E+AAPI CAGVT Y+AL  + A+PG++               QYA AMGL V+A+D GD+K +L    GAD  V+   H D  ++IK
Sbjct:   26 GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPG-VTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEW-VAIYGIGGLGHVAVQYAKAMGLNVVAVDLGDEKLELAKQLGADLVVN-PKHDDAAQWIK 225          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 98/203 (48.28%), Postives = 125/203 (61.58%), Query Frame = 2
Query:  164 GEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIK 772
            GEVLVR+   GVCHTDLHA  GDWP KP+LPL+ GHEG G +  +G G +T+LKVG  VGI WL  +C  C+ C  G E  C   + +GYSVDG + +Y  + A +V  IPD L  E+AAPI CAGVT Y+AL  + A+PG++               QYA AMGL V+A+D GD+K +L    GAD  V+     D  KF+K
Sbjct:   26 GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPG-VTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEW-VAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN-PLKEDAAKFMK 225          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.858e-45
Identity = 93/194 (47.94%), Postives = 119/194 (61.34%), Query Frame = 2
Query:  143 QQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGAD 724
            ++  L+ GEVLV+++  GVCHTDLHA  GDWP KP+LPL+ GHEG G +V +  G + ++KVG  VGI WL  +C +CE C  G E  C      GYSVDG + +Y  + A +V  IPD L   + APILCAGVT Y+AL  S ARPG++               QYA AMGL V+A+D  D+K KL    GAD
Sbjct:   19 ERPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKG-VKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGARPGEW-VAIYGIGGLGHIALQYAKAMGLNVVAVDISDEKSKLAKDLGAD 210          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.017e-42
Identity = 97/240 (40.42%), Postives = 133/240 (55.42%), Query Frame = 2
Query:   62 DYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKP---RLPLVGGHEGAGPIVAIGDGT-LTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAA-AMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKF 766
            + PK   A ++ +       V +  VP+  D    EVL+ + +SGVCH+D       W   P   +   VGGHEG G +V +G G   + LK+G  VG+KW++ +C  C  C++G +  C   + SGY   GTFQQY +  A++VTPIPDGLP  +AAP+LCAGVTVY +L  SKA+PGQ+               Q AA  MGLRVI +D G  K +L  + GA+ FVD       +KF
Sbjct:    5 EIPKKQKAVIYDNPGTVSTKVVELDVPEPGD---NEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLCFNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLKRSKAQPGQWIVISGAGGGLGHLAVQIAAKGMGLRVIGVDHG-SKEELVKASGAEHFVDITKFPTGDKF 240          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42
Identity = 91/205 (44.39%), Postives = 117/205 (57.07%), Query Frame = 2
Query:  122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 736
            +++ PVPQ     PG+VL++ + +GVCHTDLHA KGDWP +P  P + GHEG G +  +G   +T LK G  VG+ WL  +C  C  CR G E  C   Q +GYSVDGTF QY ++    V  +P  L    AAP+LCAGVTVY+ L  ++ RPG++               QYA AMG+ V A D   DK  L    GAD  VD
Sbjct:   17 IEEVPVPQPG---PGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLG-AEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLCGSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEVRPGEW-VLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALAEKLGADLVVD 216          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42
Identity = 97/227 (42.73%), Postives = 125/227 (55.07%), Query Frame = 2
Query:   56 TLDYPKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 736
            T++ P T  A VF   N  ++ V+  PVP  AD    E+LV+++YSG+CH+DLH W GD       PLVGGHEGAG +V IG   +T  ++G   G+K +  +CL+CE C++G E  C   Q  G+   GTFQ+Y          I     L  AAPILCAGVTVY+AL  S   PGQ                QYA AMG+RV+A+D G  K   C   GA+ FVD
Sbjct:    2 TVELPSTQRALVFDTWNGPLE-VRQVPVPSPAD---DEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKN-VTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQNYGFDRSGTFQEYLTIRGVDAAKINKDTNLAAAAPILCAGVTVYKALKESNVAPGQIIVLTGAGGGLGSLAIQYACAMGMRVVAMDHG-SKEAHCKGLGAEWFVD 222          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.539e-38
Identity = 86/229 (37.55%), Postives = 123/229 (53.71%), Query Frame = 2
Query:   68 PKTGAACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 754
            P T +A +F+ +   ++ V+   VPQ  +    E+LV+++YSG+CH+DLH W+GD+      PL+GGHEGAG +V IG   +    +G   GIK +  +CL+CE C+ G E  C   Q  G    GTFQ+Y          + +   L  AAP+LC GVT Y++L  +  +PGQ                QYA AMG+RV+A+D    K   C + GA+ FVD  D  D
Sbjct:    7 PATQSALIFEKYGGPLE-VRQVSVPQPQE---NELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGS-KVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHIQNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKAMGMRVVAVD-HISKEDHCRNLGAEWFVDAFDTPD 229          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHP_ECOLI (Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.537e-33
Identity = 79/215 (36.74%), Postives = 108/215 (50.23%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGAD 724
            AA V KDH+ ++ +           LK GE L++++  GVCHTDLH   GD+  K  + L  GHEG G +  +G G +T+LK G    + W  + C  CE C  G E  C   + +GYSVDG   +  +  A +   +PDGL    A+ I CAGVT Y+A+  SK RPGQ+                       +VIAID  D++ KL    GAD
Sbjct:    3 AAVVTKDHHVDVTY------KTLRSLKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVIL--GHEGIGVVAEVGPG-VTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGAD 208          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
ADH1_BACST2.115e-4849.26Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST6.803e-4748.28Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_BACST2.858e-4547.94Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_EMENI1.017e-4240.42Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADHA_RHIME1.734e-4244.39Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_CAEEL1.734e-4242.73Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
ADH2_CAEEL7.539e-3837.55Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
ADHP_ECOLI9.537e-3336.74Alcohol dehydrogenase, propanol-preferring OS=Esch... [more]
ADH_STAAW1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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