FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAC (Alcohol dehydrogenase OS=Staphylococcus aureus (strain COL) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAAB (Alcohol dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAA8 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.073e-32
Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 736
            AA V KDH  +I+        +  +LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + D  + +LKVG  V I W+  +C +CE C  G E  C     +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S   PGQ+                    MG +V+A D  DDK       GAD  ++
Sbjct:    3 AAVVTKDHRVSIE------EKRLRELKPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIEVADN-VDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAIIN 212          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31
Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 736
            AA V KDH  +I+        +  +L+PGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ I D  + +LKVG  V I W+  +C +CE C  G E  C     +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S   PGQ+                    MG +V+A D  DDK       GAD  ++
Sbjct:    3 AAVVTKDHRVSIE------EKRLRELRPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIKIADN-VDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAIIN 212          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.166e-30
Identity = 78/231 (33.77%), Postives = 112/231 (48.48%), Query Frame = 2
Query:   80 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIK 772
            AA + KDH   +   K  P      LK GE L+ ++Y GVCHTDLH   GD+  +     + GHEG G +  +G+G +T+LKVG    + W    C  CE C  G E  C   + +GY+VDG   +  +  A +   +PDGL    A+ I CAGVT Y+A+  S+ +PGQ+                       +VIAID  D++       GAD  ++   + D  K I+
Sbjct:    3 AAVITKDHTIEVKDTKLRP------LKYGEALLEMEYCGVCHTDLHVKNGDFGDETGR--ITGHEGIGIVKQVGEG-VTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVKVSQIQPGQWLAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLAFAKELGADMVIN-PKNEDAAKIIQ 223          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
ADH_STAAR1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAC1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAB1.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA81.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA31.627e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAEQ8.073e-3235.16Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH_STAES1.377e-3135.16Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH1_ZYMMO1.166e-3033.77Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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