FC872123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23 Identity = 69/202 (34.16%), Postives = 101/202 (50.00%), Query Frame = 2 Query: 167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQA-QCSGYS------VDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL-LNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFED 745 +V +V + G+CH+DLH K +W PLV GHE G + +G +T K G+ VG+ L SC C++C EG+E C ++ Q G+ G + + V V IPD LPL+ AAP+LCAG+TVY + + +PG + ++A AMG +V I T + KR + GAD F+ D Sbjct: 35 DVRFKVLFCGICHSDLHMVKNEW-GMSTYPLVPGHEIVGVVTEVG-AKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMH-IGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRD 233
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23 Identity = 70/215 (32.56%), Postives = 99/215 (46.05%), Query Frame = 2 Query: 167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS---KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDK-RKLCASYGADKFVDFEDHSDPEKFIKAI 778 +V ++V Y G+CHTDLH DW P+V GHE G + +G + KVG VG+ +A SCLDCE+CR E C + + G G + V++ R V IPD LPL+ AAP+LCAG+TVY + +A ++ A GL V I T K R+ + AD FV D + +++ Sbjct: 37 DVTIKVKYCGMCHTDLHFIHNDWGIT-MYPVVPGHEITGVVTKVGTN-VAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSL 249
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHA_MYCTU (Probable alcohol dehydrogenase adhA OS=Mycobacterium tuberculosis GN=adhA PE=3 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.168e-22 Identity = 69/207 (33.33%), Postives = 95/207 (45.89%), Query Frame = 2 Query: 137 VPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIV----AIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFED 745 VP+ A P E+LV V GVC TDLH +GD P R ++ GHE G ++ A+G G VGI WL +C C+ CR G E C Q++ +G+ DG + ++ A +P G + AP+LCAG+ YR+LL ++ PG Q A A G + + G RKL GA D D Sbjct: 33 VPRPA---PSELLVAVHACGVCRTDLHVTEGDLPVH-RERVIPGHEVVGEVIEVGSAVGAAAGGEFDRGDRVGIAWLRHTCGVCKYCRRGSENLCPQSRYTGWDADGGYAEFTTVPAAFAHHLPSGYSDSELAPLLCAGIIGYRSLLRTELPPGG-RLGLYGFGGSAHITAQVALAQGAEIHVMTRGARARKLALQLGAASAQDAAD 234
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22 Identity = 73/213 (34.27%), Postives = 100/213 (46.95%), Query Frame = 2 Query: 161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEA-------TCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFEDHSDPEKFIKA 775 P +V V+V Y G+CHTDLH K D PLV GHE G +V +G ++ KVG VG+ L SC +C C+ IE C+ G G F + V + V IP+G+ EQAAP+LCAG+TVY L + + + A AMG V I + + KR+ + GAD D+ SD +K +A Sbjct: 34 PEDVEVKVLYCGLCHTDLHQVKNDL-GMSNYPLVPGHEVVGEVVEVGPD-VSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGAD---DYLVSSDTDKMQEA 241
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22 Identity = 65/202 (32.18%), Postives = 96/202 (47.52%), Query Frame = 2 Query: 167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC-------SQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKAR-PGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFED 745 +V ++V Y G+CHTDLH K +W P+V GHE G + +G G +T K G VG+ + DSC C++C +G E C + G + G F V +V +P LP + AAP+LCAGVTVY ++ PG++ ++ A G++V I + KR + GAD F+ D Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEW-GNAMYPVVPGHEIVGVVTGVGAG-VTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKH-LGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRD 232
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22 Identity = 62/197 (31.47%), Postives = 95/197 (48.22%), Query Frame = 2 Query: 167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVD-------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFV 733 +V++++ Y G+CH+DLH+ K +W PLV GHE AG + G +T K G VG+ + +SC C++C +G+E C + SVD G + V + R V P+ +PL++ AP+LCAG+TVY + ++A A G+ V I + KR + GAD FV Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWK-NATYPLVPGHEIAGVVTEAGKN-VTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGADAFV 226
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.799e-22 Identity = 71/217 (32.72%), Postives = 106/217 (48.85%), Query Frame = 2 Query: 161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS---------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQ---AAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775 P +V + + Y GVCH+DLH + +W A P V GHE G +VA+GD + G VG+ + DSC CE C +G+E C + G+++ G QQ V + R+V I P EQ AP+LCAG+T Y L + +A PG+ + A AMG V+A T + KR+ + GAD+ V+ + + +K+ Sbjct: 27 PNDVKIEIAYCGVCHSDLHQVRSEW-AGTVYPCVPGHEIVGRVVAVGD-QVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVV-HERYVLRIRH--PQEQLAAVAPLLCAGITTYSPLRHWQAGPGK-KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKS 237
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.799e-22 Identity = 63/201 (31.34%), Postives = 92/201 (45.77%), Query Frame = 2 Query: 167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC-------SQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFED 745 +V ++V Y G+CHTDLH K +W P+V GHE G + +G G +T K G VG+ + DSC C++C +G E C + G + G F V +V +P LP + AAP+LCAGVTVY ++ ++ A G++V I + KR + GAD F+ D Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEW-GNAMYPVVPGHEIVGVVAGVGAG-VTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRD 232
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 152 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYS--------VDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 D P +V + + ++G+CH+D+H K +W +P P+V GHE AG + A+G +T + G VG+ DSC +C +C GIE C Y+ G + + V +V IPD LPL+ AAP+LCAG+T+Y L Sbjct: 25 DPGPHDVAIDIKFAGICHSDIHTVKAEW-GQPNYPVVPGHEIAGVVTAVGS-EVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPL 167
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 152 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYS--------VDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 D P +V + + ++G+CH+D+H K +W +P P+V GHE AG + A+G +T + G VG+ DSC +C +C GIE C Y+ G + + V +V IPD LPL+ AAP+LCAG+T+Y L Sbjct: 25 DPGPHDVAIDIKFAGICHSDIHTVKAEW-GQPNYPVVPGHEIAGVVTAVGS-EVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPL 167 The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bpback to top |