FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL-LNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFEDHSDPEKFI 769
            +V  +V Y G+CH+DLH  K +W      PLV GHE  G +  +G   +   KVG  VG+  +  SC  CENC + +E  C +   +       G +  G +    V+    +  IPD LPL+ AAP+LCAG+T Y  L      +PG +               ++A AMG++V  I T   K +    + GAD F+   D    +  I
Sbjct:   37 DVTFKVLYCGICHSDLHMVKNEWGFST-YPLVPGHEIVGEVTEVGS-KVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMH-VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAI 243          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.292e-21
Identity = 67/203 (33.00%), Postives = 93/203 (45.81%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRK-LCASYGADKFVDFED 745
            P +V +++ Y GVCH+DLH  K D       P+V GHE  G ++ +G   +T  KVG+ VG+  L   C  C  C   IE  C++   S       G    G F +  V   + V  IP+GL  EQ AP+LCAGVTVY  L +   +                   + A A+G  V  I + D K+K      GAD ++   D
Sbjct:   35 PDDVYIKIHYCGVCHSDLHQIKNDL-GMSNYPMVPGHEVVGEVLEVGSN-VTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSD 235          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.292e-21
Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 2
Query:  152 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVD-------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFEDHSDPE 760
            +++  +V +R+ + GVC+ D+  W  +       PLV GHE AG +  +G   +   KVG +VG+    +SC DCENC   +E  CS+   +  SVD       G +  + + + R+   IP   PL +AAP+LCAG+TVY  ++                        ++  A GL+V    T + KR+   +  GAD FV   D +  E
Sbjct:   31 EVQSEDVSLRITHCGVCYADV-IWTRNMFNDSIYPLVPGHEIAGVVTEVG-ADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQME 239          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.204e-21
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEA-------TCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFEDHSDPEKFIKA 775
            P +V V+V Y G+CH+DLH  K D       PLV GHE  G +V +G   ++  KVG  VG+  L  SC +C  C+  IE         C+     G    G F    V     V  IP+G+  EQAAP+LCAG+TVY    +       +               + A AMG  V  I + + KR+    + GAD   D+   SD +K  +A
Sbjct:   34 PEDVQVKVLYCGLCHSDLHQVKNDL-GMSNYPLVPGHEVVGKVVEVG-ADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGAD---DYLVSSDTDKMQEA 241          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.878e-21
Identity = 70/218 (32.11%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFEDHSDPEKFIKAIKDM 787
            P +V+V+V Y G+CH+DL   + +       P+V GHE  G +  IG   +   KVG++VG+  +  SC  C NC + +E  CS+           G    G F    V     V  IP+ LPLEQAAP+LCAGVTV+  + + +   PG+                + A A GL V  I + D K++      GAD ++      D EK ++A + +
Sbjct:   34 PEDVIVKVIYCGICHSDLVQMRNEM-GMSHYPMVPGHEVVGIVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGK-KCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYL---VSKDTEKMMEAAESL 245          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.878e-21
Identity = 70/218 (32.11%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFEDHSDPEKFIKAIKDM 787
            P +V+V+V Y G+CH+DL   + +       P+V GHE  G +  IG   +   KVG++VG+  +  SC  C NC + +E  CS+           G    G F    V     V  IP+ LPLEQAAP+LCAGVTV+  + + +   PG+                + A A GL V  I + D K++      GAD ++      D EK ++A + +
Sbjct:   34 PEDVIVKVIYCGICHSDLVQMRNEM-GMSHYPMVPGHEVVGIVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGK-KCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYL---VSKDTEKMMEAAESL 245          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.759e-21
Identity = 69/204 (33.82%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFED 745
            P +V+VRV Y G+CH+DL     +       P+V GHE  G +  IG   +   KVG++VG+  +  SC  C NC   +E  CS+           G    G F    V     V  IP+ LPLEQAAP+LCAGVTVY  + +     PG+                + A A GL V  I + D K++      GAD ++  +D
Sbjct:   34 PEDVIVRVIYCGICHSDLVQMHNEM-GMSNYPMVPGHEVVGVVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGK-KCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKD 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.759e-21
Identity = 69/204 (33.82%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFED 745
            P +V+VRV Y G+CH+DL     +       P+V GHE  G +  IG   +   KVG++VG+  +  SC  C NC   +E  CS+           G    G F    V     V  IP+ LPLEQAAP+LCAGVTVY  + +     PG+                + A A GL V  I + D K++      GAD ++  +D
Sbjct:   34 PEDVIVRVIYCGICHSDLVQMHNEM-GMSNYPMVPGHEVVGVVTEIGS-EVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGK-KCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKD 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.412e-21
Identity = 67/204 (32.84%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARP-GQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFED 745
            P +V +++ Y G+CHTD+H  K D  A    P+V GHE  G +V +G   +T  KVG  VG   +   C  C  C+  +E  C++   S       G    G F  + V   + V  IPDG+  EQAAP+LCAGVTVY  L +   +                    + A AMG  V  I + D K++    + GAD ++   D
Sbjct:   34 PEDVFIKIIYCGICHTDIHQIKNDLGAS-NYPMVPGHEVVGEVVEVGSD-VTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSD 235          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20
Identity = 65/205 (31.71%), Postives = 93/205 (45.37%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC-------SQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFEDHS 751
            P +V +R+   G+CHTDLH  K D       P+V GHE  G +V +G   ++   VG  VG+  L   C  C  C   +E  C       +    +G    G F +  V + + V  IP+G+ +EQAAP+LCAGVTVY  L +   +                   + A AMG  V  I + + KR +     GAD +V   D +
Sbjct:   34 PEDVNIRIICCGICHTDLHQTKNDL-GMSNYPMVPGHEVVGEVVEVGSD-VSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQA 236          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
MTDH_FRAAN9.892e-2231.90Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH_MEDSA1.292e-2133.00Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH4_ORYSJ1.292e-2130.33Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_TOBAC2.204e-2133.33Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_PINTA2.878e-2132.11Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA2.878e-2132.11Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH7_PICAB3.759e-2133.82Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB3.759e-2133.82Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH1_ARACO6.412e-2132.84Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH5_ARATH1.428e-2031.71Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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