FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.866e-20
Identity = 65/197 (32.99%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS--GYSVDGT-----FQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRK-LCASYGADKFV 733
            EV V+V Y G+CH+DLH  K +W +    PLV GHE  G +  IG+  ++   +G  VG+  + DSC  CE+CRE  E  C++A  +  G   DGT     +  + V   R+   IP  LPL  AAP+LCAG+++Y  +                         ++A A G +V  + +   K K    + GAD F+
Sbjct:   40 EVRVKVLYCGICHSDLHCLKNEWHSSI-YPLVPGHEIIGEVSEIGN-KVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFL 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20
Identity = 71/202 (35.15%), Postives = 98/202 (48.51%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCS-QAQCSGY-SVDG--TFQQYA---VSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL-LNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFED 745
            +V  +V Y GVCH+DLH  K +W      P+V GHE  G +  +G   +   KVG  VG+  L  SCL CENC +  E  C+ Q Q   + +VDG  T+  YA   V+    V   P+ LPL+  AP+LCAG+T Y  L  +   +PG                 + A A G  V  I T + K+ +     GAD+F+   D
Sbjct:   16 DVRFKVLYCGVCHSDLHMVKNEW-GMTTYPIVPGHEIVGRVTEVGS-KVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGT-KVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSD 214          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20
Identity = 68/203 (33.50%), Postives = 91/203 (44.83%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCS-------GYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFED 745
            P +V V V   G+CHTD+H  K D       P+V GHE  G +V +G   +T  + G  VG+  +  SC +C  C   IE  C++   S       G    G F    V   + V  IPDG+  EQAAP+LCAGVTVY  L +   +                   + A AMG  V  I + D KR     + GAD ++   D
Sbjct:   34 PQDVYVEVMCCGICHTDVHQIKNDL-GMSNYPMVPGHEVVGEVVEVGS-EVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSD 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20
Identity = 61/212 (28.77%), Postives = 97/212 (45.75%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVD-------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS-YGADKFVDFEDHSDPEKFIKAI 778
            +V + + + GVC+ D+  W  +     + PLV GHE AG +  +G   +   KVG +VG+    +SC +CE C EG E  C++   +   +D       G +  + V + R+   IP   PLE AAP+LCAG+TVY  ++                        ++  A GL V    T   K++   +  GA+ FV   DH   +   K++
Sbjct:   37 DVSLTITHCGVCYADV-IWSRNQHGDSKYPLVPGHEIAGIVTKVGPN-VQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSL 246          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20
Identity = 67/228 (29.39%), Postives = 99/228 (43.42%), Query Frame = 2
Query:  131 HPVPQQADLKP---GEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC--------SGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD-FEDHSDPEKFIKAI 778
            HP     D KP    +V V ++  G+C +D H   G+W   P   ++G HE  G +V +G    T +K+G  VG+   A +C +CE C+   E  C+             GY   G F  +   +      IP+ +P   AAP+LC G+TV+  LL +   PG+                  A AMG  V A   G  KR+     GAD ++   ED    E++  A+
Sbjct:   20 HPKLVSFDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILG-HEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNGCGPGK-RVGIVGIGGIGHMGILLAKAMGAEVYAFSRGHSKREDSMKLGADHYIAMLEDKGWTEQYSNAL 245          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.182e-20
Identity = 64/202 (31.68%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVD-------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL-LNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFVDFED 745
            +V  +V + G+CHTDL   K +W      PLV GHE  G +  +G   +     G  VG+ ++A SC  C++C +G E  C +   +  + +       G +  + V     +  IPD LPL+ AAP+LCAGVTVY  +  +   +PG +               ++A AMG +V  I T + KR +     GAD F+   D
Sbjct:   35 DVRFKVLFCGICHTDLSMAKNEW-GLTTYPLVPGHEIVGVVTEVG-AKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMH-IGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRD 233          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.156e-20
Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC-------SQAQCSGYSVDGTFQQYAVSYARHVTPIPDG------LPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKR-KLCASYGADKFV 733
            +V+V++ + G+CH+DL   K +W    + P+V GHE  G +  +G  ++     G  VG+ ++A +C  C NCR+G E  C       + A   G +V G F + AV   R+V  IP G       PL++ AP+LCAGVTVY  +      RPG +               ++  A G++V  I T   K  +     GAD F+
Sbjct:   34 DVVVKILFCGICHSDLSTIKNEW-GNAKYPVVPGHEIVGVVAEVGS-SVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVH-LGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFL 234          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.209e-19
Identity = 67/215 (31.16%), Postives = 99/215 (46.05%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSV--DGT-----FQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFEDHSDPEKFIKAIKDM 787
            +V V++ + GVCHTDLH  K DW      P+V GHE  G    +G   +T  K G  VG+  ++ SC  CE+C + +E  C Q   +  ++  DGT     + +  V   R V   P+ LP +  AP+LCAG+TVY  +                         +   A GL+V  I +   K +   ++ GAD F+     +DP+K   AI  M
Sbjct:   39 DVTVKILFCGVCHTDLHTIKNDW-GYSYYPVVPGHEIVGIATKVGKN-VTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFL---VTTDPQKMKAAIGTM 248          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.209e-19
Identity = 69/216 (31.94%), Postives = 98/216 (45.37%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQA--QCSGYSVDGTFQQYAVSYA-----RHVTPIPDGLPLEQAAPILCAGVTVYRAL-LNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDK-RKLCASYGADKFVDFEDHSDPEKFIKAIKDM 787
            +V V++ + GVCH+DLH  K  W    R P++ GHE  G    +G   +T  K G  VG+  +  SC  CE+C + +E  C +     +  S DGT  Q   S       R V  IPDGLP +  AP+LCAG+TVY  +      +                   +   A GLRV  I    +K R+     GAD F+     +D +K  +A+  M
Sbjct:   33 DVTVKILFCGVCHSDLHTIKNHWGFS-RYPIIPGHEIVGIATKVGKN-VTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFL---VTTDSQKMKEAVGTM 243          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.209e-19
Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 2
Query:  161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ-------AQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASY-GADKFVDFEDHS 751
            P ++ ++V   G+CH+D+H  K D       P+V GHE  G ++ +G   +T  +VG  VG   +   C  C  C    E  C++           G    G F    V   R V  IPDGL  EQAAP++CAGVTVYR L+    +                   + A AMG  V  I + D KR     + GAD ++   D +
Sbjct:   34 PEDLYIKVLSCGICHSDIHQIKNDL-GMSHYPMVPGHEVVGEVLEVGS-EVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDEN 236          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
CADH6_ARATH1.866e-2032.99Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_PETCR2.436e-2035.15Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH1_OCIBA2.436e-2033.50Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_ARATH2.436e-2028.77Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADH7_YEAST2.436e-2029.39NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
CADH7_ARATH3.182e-2031.68Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH9_ORYSJ4.156e-2031.86Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH9_ARATH1.209e-1931.16Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH3_ARATH1.209e-1931.94Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH1_EUCGU1.209e-1931.22Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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