FC872128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 80/161 (49.69%), Postives = 109/161 (67.70%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 700 +K V VGDGAVGKTCLLISY TFPTDY+PT+F+N+ N+ NG + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE+KH+ P PI+LVG K DL + + + + E L K +GA A+I+CS++ ++N+ Sbjct: 73 LKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNL------SDLVEPSSAESLAKRLGAFAHIQCSARLKENI 227
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHOV_BOVIN (Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40 Identity = 82/166 (49.40%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED +RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ+N+K Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQKNLK 195
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40 Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ +PI+LV K DLR+D + + P++T +G+ + + IGA Y+ECS+KT + V+ Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVR 169
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39 Identity = 79/161 (49.07%), Postives = 110/161 (68.32%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 700 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G + L LWDTAGQEDY+RLRPLSY + V ++ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + PI+ +G+ + + IGA Y+ECS+K + V Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGV 168
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.734e-39 Identity = 79/161 (49.07%), Postives = 107/161 (66.46%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD-KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P +PIILVG K D+ + + P+ +E+ I A Y+ECS+KT++ V+ Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMKQEPVKPDDAKEMGSRIKAFGYLECSAKTKEGVR 167
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38 Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 2 Query: 215 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 ++IK V GDGAVGKT LLI++ S FP DY PTVFDNFS + NLGL+DTAGQED++RLRPL Y D+F++ +S+I+ SY NV KW E+K Y +P+ILVGT+ DLR DK + + PIS +G +RK IGA A+ ECS + +NVK Sbjct: 2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQAPISYEEGMMMRKRIGAKAFTECSVVSGKNVK 167
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38 Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 700 IK VG+G +GKT +L+SYTSN+ +Y PTVFDN+S ++ N NL LWDTAGQE++++LR LSY DVF+L FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + + +PIST QG EL K I A ++ECS+ TQ+N+ Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNL 165
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 81/162 (50.00%), Postives = 106/162 (65.43%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 +K V VGDG GKTCLL++YT N FP+ YVPTVF+N+ V NG TV L LWDTAGQE+Y+RLRPLSY D+ ++ F++ ++ S ENV W PE+ HY PG+PIILVGTK DL D ++H ++ ++ K IGA I S+KT NV+ Sbjct: 76 MKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAKTMFNVR 225
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 72/164 (43.90%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKA 706 +K V VGDG GKT L++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V +L F + + S++NVS +W PE+ H+ GVPII+VG K+DLR DK + P++ +G ++ + +GA AY+ECS++ NV+A Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEA 181
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 74/166 (44.58%), Postives = 104/166 (62.65%), Query Frame = 2 Query: 215 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKA 706 R +K V VGDG GKT LL+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPII+VG K DL DK + G P++ +G+E+ + +GA AY+ECS++ NV A Sbjct: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 The following BLAST results are available for this feature:
BLAST of FC872128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872128 ID=FC872128; Name=FC872128; organism=Citrus clementina; type=EST; length=706bpback to top |