FC872128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAC2_CAVPO (Ras-related C3 botulinum toxin substrate 2 OS=Cavia porcellus GN=RAC2 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 8.202e-54 Identity = 101/163 (61.96%), Postives = 124/163 (76.07%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IKCV VGDGAVGKTCLLISYT+N FP +Y+PTVFDN+SANV+V+ VNLGLWDTAGQEDY+RLRPLSY DVF++ FSL+S ASYENV W P+++H+ P PIIL+GTKLDLRDDK+ + PI+ QG L K I + Y+ECS+ TQ+ +K Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVHANWYPKVRHHCPSTPIILLGTKLDLRDDKETIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.069e-53 Identity = 99/165 (60.00%), Postives = 126/165 (76.36%), Query Frame = 2 Query: 215 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 R +K V VGDGAVGKTC+LISYT+N FP +Y+PTVF+N+++++VV+ +NLGLWDTAGQEDY+RLRPLSY DVF++ FS+I+ ASYENV KW PE+ + P VPIILVGTK+D+RDD + + VPI QG+EL K IGA YIECS+ TQ N+K Sbjct: 2 RPVKLVIVGDGAVGKTCMLISYTTNAFPNEYIPTVFENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRLAEKNIVPIQPPQGDELAKKIGAVKYIECSALTQANLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RACB_DICDI (Rho-related protein racB OS=Dictyostelium discoideum GN=racB PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.446e-52 Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IK V VGDGAVGKTCLLISYTSN+FPT+YVPTVFDN+SANV+V+ TV+LGLWDTAGQEDY+RLRPLSY DVF++ F++IS+ SY NV KW PE+ H+ P IILVGTK DLR+DK+ + P++ QGE++ K I A Y+ECS+ TQ+ +K Sbjct: 4 IKLVVVGDGAVGKTCLLISYTSNSFPTEYVPTVFDNYSANVMVDNKTVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFAIISQTSYTNVKSKWWPEVTHHCPNCTIILVGTKCDLREDKESLEKLREKHQQPLTFQQGEQMAKEIKAFCYMECSALTQKGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAC1_CAEEL (Ras-related protein ced-10 OS=Caenorhabditis elegans GN=ced-10 PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.003e-51 Identity = 98/163 (60.12%), Postives = 122/163 (74.85%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IKCV VGDGAVGKTCLLISYT+N FP +Y+PTVFDN+SANV+V+G +NLGLWDTAGQEDY+RLRPLSY DVF++ F+L + AS+ENV KW PE+ H+ P PIILVGTK DLR+D+ + P+S QG + K I A Y+ECS+ TQ+ +K Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.488e-51 Identity = 95/169 (56.21%), Postives = 121/169 (71.60%), Query Frame = 2 Query: 203 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 MSA+ IK V +GDGAVGKTCLLISY +N FP DY+PTVFDN+ N+ + LGLWDTAGQE+Y++LRPLSY A+VF++ FS+ + S+ENV KW PE+ H+ P VP ILVGTKLD RDD+ + G PI+T QG +L + I A Y+ECS+KT QN+K Sbjct: 1 MSAAEVIKLVVIGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLK 169
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: CDC42_SCHPO (Cell division control protein 42 homolog OS=Schizosaccharomyces pombe GN=cdc42 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IKCV VGDGAVGKTCLLISYT+N FP+DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+ S AS+ENV +KW PE+ H+ PGVP ++VGT++DLRDD Q + P++ QGE L + +GA Y+ECS+ TQ+ +K Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: CDC42_CANAL (Cell division control protein 42 homolog OS=Candida albicans GN=CDC42 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 95/163 (58.28%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 IKCV VGDGAVGKTCLLISYT++ FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+IS AS+ENV +KW PE+ H+ PGVPII+VGT+ DLR+D + PI+ QGE+L K + A Y+ECS+ TQ+ +K Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTSKFPADYVPTVFDNYAVTVMIGDEPFTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPASFENVKEKWFPEVHHHCPGVPIIIVGTQTDLRNDDVILQRLHRQKLSPITQEQGEKLAKELRAVKYVECSALTQRGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: CDC42_YEAST (Cell division control protein 42 OS=Saccharomyces cerevisiae GN=CDC42 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 +KCV VGDGAVGKTCLLISYT+N FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+IS S+ENV +KW PE+ H+ PGVP ++VGT++DLRDDK + PI++ QG L + + A Y+ECS+ TQ+ +K Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLK 166
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 4.658e-49 Identity = 90/163 (55.21%), Postives = 124/163 (76.07%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ PI QG++L K IGA Y+ECS+ TQ+ +K Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLK 172
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.083e-49 Identity = 89/163 (54.60%), Postives = 124/163 (76.07%), Query Frame = 2 Query: 221 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ P+ QG++L K IGA Y+ECS+ TQ+ +K Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLK 172 The following BLAST results are available for this feature:
BLAST of FC872128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872128 ID=FC872128; Name=FC872128; organism=Citrus clementina; type=EST; length=706bpback to top |