FC872128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ I T +G L + +G + E S+K +V+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VIPTEKGRLLAEQLGFD-FFEASAKENISVR 173
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKH-YAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQG 631 K V +G+GAVGKT L++ Y+ N F + T+ +F + + G + L +WDTAGQE Y+ L P+ YR + I+ + + + S+ ++ WI ELK V + +VG K+DL D+Q + A+ + + G Sbjct: 18 KVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHK-ARNWIKELKRMLGDKVTLCIVGNKIDL--DRQRTVSEKDALEYAESVG 152
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 212 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR-------DDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVK 703 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL ++ + F + G + S GE + A++E + K QN++ Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE-----DAFLEAAKKIYQNIQ 177
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 224 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 571 K V +GD VGK+ LL +T N F + T+ F+ V G V +WDTAGQE Y + YRGA +L + + A++EN + +W+ EL+ H P + ++L+G K DLR Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
BLAST of FC872128 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 48/159 (30.19%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 227 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 700 CV +GDG VGKT + I + SN F Y PT+ D + +++ L + DTAGQ++ N +R + + FIL +S+ S++S++ + + ++ ++K + VPII++ K DL D++Q ++ +GE G +++E S+K + N+ Sbjct: 18 CV-MGDGGVGKTSITIQFISNHFVNCYDPTIEDLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQI-QSFLDQIKFLKSEKVPIIMIANKSDLDDERQ----------VTYQEGENFANRFGM-SFMEVSAKYKLNI 163 The following BLAST results are available for this feature:
BLAST of FC872128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872128 ID=FC872128; Name=FC872128; organism=Citrus clementina; type=EST; length=706bpback to top |