FC872147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 16 VKMDPQLEKETGAEF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLR 378 V DP + E A F + L+ + P CD + V+TPL T G+ + A+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N PH+ +T +AQ R Sbjct: 172 VGYDPIISPEVAASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEAQSR 294
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 25 DPQLEKETGAEF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLR 378 DP + E A F + L+ + P CD + V+TPL T G+ + + A+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N PH+ +T +AQ R Sbjct: 175 DPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEAQSR 294
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 25 DPQLEKETGAEF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLR 378 DP + E A F + L+ + P CD + V+TPL T G+ + + A+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N PH+ +T +AQ R Sbjct: 175 DPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEAQSR 294
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 70 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDML 405 LDT+L + D + + P+TE+T M ++++AKMK +++N RG ++D QA++ A G I DV+ +P P D P + N PH+ T + + AA D L Sbjct: 194 LDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305 The following BLAST results are available for this feature:
BLAST of FC872147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872147 ID=FC872147; Name=FC872147; organism=Citrus clementina; type=EST; length=658bpback to top |