FC872147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHISS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella sonnei (strain Ss046) GN=ghrB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHIB3 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SALPK (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A (strain AKU_12601) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 LYH R + + E A + DLDT+L + D V V PLT +TR +F + A+MK + +N RG ++D A++ A +G I DV+ +P D P M N PH+ T + + A D L +G+ Sbjct: 173 LYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SALPB (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 LYH R + + E A + DLDT+L + D V V PLT +TR +F + A+MK + +N RG ++D A++ A +G I DV+ +P D P M N PH+ T + + A D L +G+ Sbjct: 173 LYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SALPA (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella paratyphi A GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 LYH R + + E A + DLDT+L + D V V PLT +TR +F + A+MK + +N RG ++D A++ A +G I DV+ +P D P M N PH+ T + + A D L +G+ Sbjct: 173 LYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTTETRHLFGTTQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEHEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 42/142 (29.58%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 LY+ R D + E+ AE+ DLDT+L + D + ++ PLTE+T + ++++AKMK+ +++N RG ++D QA++ A G + DV+ +P P + N PH+ T + + A D L G+ Sbjct: 173 LYNARKHHD-EAEQRFDAEYC-DLDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIAALKDGTLHAAGLDVFEQEPLPVSSELLALRNVVALPHIGSATHETRYGMAKDAVDNLIAALNGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECOUT (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain UTI89 / UPEC) GN=ghrB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSE (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SE11) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312 The following BLAST results are available for this feature:
BLAST of FC872147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872147 ID=FC872147; Name=FC872147; organism=Citrus clementina; type=EST; length=658bpback to top |