FC872147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECO55 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain 55989 / EAEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECO45 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECO27 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_ECO24 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP--VQNYIVK 456 LY+ R + P+ E+E AEF+ L+ +L + D VV+ PLT++T M + + MK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N + PH+ T A+ A V L + GE P V +VK Sbjct: 177 LYYSRTRK-PEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFS-LKNVILAPHIGSATFGAREGMAELVARNLIAFKNGEVPPTLVNKEVVK 327
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHIBS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 4 (strain Sb227) GN=ghrB PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SALG2 (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12 Identity = 45/142 (31.69%), Postives = 67/142 (47.18%), Query Frame = 1 Query: 1 LYHDRVKMDPQLEKETGAEFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 LYH R + + E A + DLDT+L + D V V PLT +TR +F + A+MK + +N RG + D A++ A +G I DV+ +P D P M N PH+ T + + A D L +G+ Sbjct: 173 LYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVADENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 16 VKMDPQLEKETGAEFEEDL---DTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 + DP + DL D + D V ++ PLT T+ +F+ + +KMKKGV ++N ARG ++D A+V A +G +A + DV+ +P KD N +TPH+ +T +AQ A + + + KGE Sbjct: 248 ISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSKMKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHLGASTKEAQEGVAIEIAEAVAGALKGE 387
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHIF8 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri serotype 5b (strain 8401) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G H+AG DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHVAGL--DVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
BLAST of FC872147 vs. ExPASy Swiss-Prot
Match: GHRB_SHIDS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ghrB PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 426 DLDT+L + D V + PLT++T +F ++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N PH+ T + + AA D L +G+ Sbjct: 193 DLDTLLQESDFVCLILPLTDETYHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312 The following BLAST results are available for this feature:
BLAST of FC872147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872147 ID=FC872147; Name=FC872147; organism=Citrus clementina; type=EST; length=658bpback to top |