FC872154

Overview
NameFC872154
Unique NameFC872154
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length515
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3954 contig Ccv1_Contig3954:196..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872154 vs. ExPASy Swiss-Prot
Match: ERV25_CANGA (Endoplasmic reticulum vesicle protein 25 OS=Candida glabrata GN=ERV25 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.073e-12
Identity = 44/152 (28.95%), Postives = 74/152 (48.68%), Query Frame = 1
Query:   25 LTVRVTSAYGNSYHYADR-VDSGQFAFTAAEAGDYMACFWAVDHSPQ----TTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWHLKTFFEKKKLI 465
            L + V  + GN Y      V   + AFTA     +  CF     S +        I+ D  +G QA+DW+ ++    +  +ELEL+K+ +    I  E+ YL+ REE ++  N  TN R+  FS   + +  ++   Q+ +LK +F+ K +I
Sbjct:   57 LNLYVHDSNGNEYRRLKNFVGEQRIAFTAPATTSFDVCFENTLDSNRGNRNAKRAIELDIESGSQARDWNKISATEKLRPIELELRKIEELTDEIVDELNYLKNREERLRNTNESTNERVRNFSVLVIIVLTSLGAWQVNYLKNYFKSKHII 208          
BLAST of FC872154 vs. ExPASy Swiss-Prot
Match: ERV25_KLULA (Endoplasmic reticulum vesicle protein 25 OS=Kluyveromyces lactis GN=ERV25 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 41/151 (27.15%), Postives = 77/151 (50.99%), Query Frame = 1
Query:   22 KLTVRVTSAYGNSYHY-ADRVDSGQFAFTAAEAGDYMACFWAVD--HSPQTTVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWHLKTFFEKKKLI 465
            +L + V  + GN Y    D     +  FTA ++  +  CF  V   +    + +I+ D  +G +A+DW+ +     +  +E+EL+++ +    I  E  YL+ REE +++ N  TN R+  FS   + + +A+   Q+ ++K FF  K +I
Sbjct:   62 QLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSIAVIVVLVALGAWQVNYMKNFFRAKHII 212          
BLAST of FC872154 vs. ExPASy Swiss-Prot
Match: ERV25_USTMA (Endoplasmic reticulum vesicle protein 25 OS=Ustilago maydis GN=ERV25 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  169 VTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWHLKTFFEKKKLI 465
            VTID D   G  A D++ +A + S+  +E E++KL    + I  EM YL++RE  M + N  TN R+  F+  +L   IA+   Q++HL+ FF++K LI
Sbjct:  125 VTIDLDVDIGADAVDYNAIANQESLSGLETEMRKLEAVANEIVNEMEYLKKRELRMADTNLSTNMRVTNFAILTLIALIALGVWQVFHLRGFFKRKYLI 223          
BLAST of FC872154 vs. ExPASy Swiss-Prot
Match: ERV25_YARLI (Endoplasmic reticulum vesicle protein 25 OS=Yarrowia lipolytica GN=ERV25 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.601e-11
Identity = 44/152 (28.95%), Postives = 75/152 (49.34%), Query Frame = 1
Query:   22 KLTVRVTSAYGNSYHYADRVDSGQFA-FTAAEAGDYMACFWAVDHSPQT---TVTIDFDWRTGVQAKDWSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMAWFSGFSLFICIAVAGMQLWHLKTFFEKKKLI 465
            +L+V V  A+GN Y     V   +   F++ +      CF  V +S Q    T  ID     G  A+DW  +     +   E++L+K+ + V  + +EM YL+ RE  +++ N  TN R+ +FS       IA+   Q+ +L+++F  K +I
Sbjct:   60 QLSVVVRDAHGNEYTRIKNVLGREITTFSSHQDTALDVCFHNVANSHQDLGKTKEIDLSVAIGANARDWEQIQASEKLKPAEVQLRKIEEIVDEVDKEMNYLKMREIRLRDTNESTNRRVKFFSVGITLALIALGVWQIIYLRSYFRSKHII 211          
The following BLAST results are available for this feature:
BLAST of FC872154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ERV25_CANGA3.073e-1228.95Endoplasmic reticulum vesicle protein 25 OS=Candid... [more]
ERV25_KLULA6.845e-1227.15Endoplasmic reticulum vesicle protein 25 OS=Kluyve... [more]
ERV25_USTMA1.525e-1138.38Endoplasmic reticulum vesicle protein 25 OS=Ustila... [more]
ERV25_YARLI2.601e-1128.95Endoplasmic reticulum vesicle protein 25 OS=Yarrow... [more]

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Properties
Property NameValue
Genbank descriptionC05701C05SK AbsCOv1 Citrus clementina cDNA clone C05701C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872154 ID=FC872154; Name=FC872154; organism=Citrus clementina; type=EST; length=515bp
CGGCCGGGTGCCCGAATCCATAAACTCACCGTCAGGGTGACGTCGGCTTA
CGGTAATAGTTATCATTACGCGGACCGAGTTGACTCGGGCCAGTTTGCGT
TTACGGCTGCCGAGGCTGGCGATTACATGGCTTGTTTTTGGGCCGTTGAT
CATAGCCCGCAAACAACGGTGACGATTGATTTTGATTGGAGGACTGGTGT
GCAAGCTAAGGACTGGTCTAACGTTGCAAAGAAAGGTTCTGTTGACGTCA
TGGAATTAGAGCTGAAGAAGTTGTATGATACTGTTAGTTCTATTCACCAG
GAGATGTTTTATCTCCGTGAAAGAGAAGAAGAAATGCAGGAGCTGAACCG
TGTTACTAACTCCAGAATGGCCTGGTTTAGTGGGTTTTCGCTGTTTATAT
GCATTGCTGTTGCTGGCATGCAACTATGGCACTTGAAAACATTCTTTGAG
AAAAAGAAGCTTATATAAGAGAAGCGTCAATTAAATTAAGCAATTTTCTA
TTTGGTGCTCTTGTA
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